Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC106754.2-201ENST00000623006 233 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 Y_RNA.48-201ENST00000362710 103 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 RNY4P14-201ENST00000363656 96 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 RNU6-1059P-201ENST00000363752 98 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 RNU6-596P-201ENST00000365395 98 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 RNU6-1013P-201ENST00000384180 107 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 Y_RNA.554-201ENST00000384672 102 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 AC016907.1-201ENST00000419483 435 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 MTND3P23-201ENST00000431980 347 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 STAG3L5P-204ENST00000443759 179 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 AC092991.1-201ENST00000477176 376 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 AC010469.2-201ENST00000496412 480 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 Y_RNA.683-201ENST00000516508 93 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 RNU6-1088P-201ENST00000516850 104 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 Y_RNA.706-201ENST00000516933 99 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 RNU6-165P-201ENST00000517170 99 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 AL513423.1-201ENST00000621695 132 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 AC068137.4-201ENST00000638485 296 ntBASIC0.97□□□□□ -2.25
FDFT1P37268 AC018630.2-201ENST00000534866 2403 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
FDFT1P37268 RNU6-222P-201ENST00000362438 107 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 RNU6-595P-201ENST00000363944 107 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 RNU6-831P-201ENST00000384548 107 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 SNORA12.1-201ENST00000390873 148 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 USP9YP16-201ENST00000430287 407 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 USP9YP30-201ENST00000430729 455 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 MRPS10P1-201ENST00000448483 130 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 HSPE1P13-201ENST00000451143 297 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 USP9YP23-201ENST00000455085 407 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 RNU6-922P-201ENST00000516753 99 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.96□□□□□ -2.26
FDFT1P37268 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.96□□□□□ -2.26
FDFT1P37268 MIR4778-201ENST00000577635 80 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 AL162424.1-201ENST00000602325 221 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 MIR6128-201ENST00000615528 109 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
FDFT1P37268 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.96□□□□□ -2.26
FDFT1P37268 Y_RNA.89-201ENST00000363031 102 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU4-76P-201ENST00000364509 141 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU4-12P-201ENST00000365233 139 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU6-53P-201ENST00000365367 106 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 Y_RNA.450-201ENST00000384198 113 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU6-281P-201ENST00000384212 103 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 Y_RNA.490-201ENST00000384413 102 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU6-505P-201ENST00000384427 107 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU6-1148P-201ENST00000410992 104 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 AC010598.1-201ENST00000510378 103 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU6-1114P-201ENST00000516022 107 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 RNU6-566P-201ENST00000516790 107 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 AC093023.1-201ENST00000547375 507 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.95□□□□□ -2.26
FDFT1P37268 AC080078.3-201ENST00000605407 463 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 AC100812.1-201ENST00000607622 580 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 AC093913.1-201ENST00000614178 329 ntBASIC0.95□□□□□ -2.26
FDFT1P37268 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.95□□□□□ -2.26
FDFT1P37268 Y_RNA.106-201ENST00000363189 100 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 Y_RNA.295-201ENST00000364918 102 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 Y_RNA.573-201ENST00000384763 105 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 MIR19B1-201ENST00000384829 87 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 MIR660-201ENST00000385235 97 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
FDFT1P37268 RAB28P5-201ENST00000427490 651 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 MTATP6P26-201ENST00000445926 662 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 COX6CP14-201ENST00000469580 174 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 AL513534.2-201ENST00000603836 250 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 AC080013.6-201ENST00000606185 215 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 SNORA28-201ENST00000606769 126 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 AC006435.5-201ENST00000624486 112 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 MIR3662-201ENST00000637030 95 ntBASIC0.94□□□□□ -2.26
FDFT1P37268 Y_RNA.157-201ENST00000363638 102 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 Y_RNA.238-201ENST00000364441 102 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 Y_RNA.265-201ENST00000364677 108 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 RNU6-842P-201ENST00000384269 107 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 RNU1-139P-201ENST00000391307 165 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 MTND1P17-201ENST00000448961 204 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.93□□□□□ -2.26
FDFT1P37268 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.93□□□□□ -2.26
FDFT1P37268 RNU7-172P-201ENST00000517125 64 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 SNORA70.22-201ENST00000517160 124 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 CBX3P8-201ENST00000532412 525 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 RPL21P9-201ENST00000556149 474 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.93□□□□□ -2.26
FDFT1P37268 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.93□□□□□ -2.26
FDFT1P37268 MIR4661-201ENST00000582720 75 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 MIR8070-201ENST00000616510 88 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.93□□□□□ -2.26
FDFT1P37268 MIR6079-201ENST00000635807 62 ntBASIC0.93□□□□□ -2.26
FDFT1P37268 MTND5P16-201ENST00000460269 1703 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 SNORA25.9-201ENST00000365087 128 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 RNA5SP118-201ENST00000410385 109 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 RNU6-1001P-201ENST00000411265 100 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 AL139396.1-201ENST00000421137 167 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.92□□□□□ -2.26
FDFT1P37268 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
FDFT1P37268 AC097462.1-201ENST00000514125 324 ntBASIC0.92□□□□□ -2.26
FDFT1P37268 SNORA31.4-201ENST00000516049 129 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms