Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RPL26P26-201ENST00000480251 434 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AC105758.1-201ENST00000506038 399 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.49□□□□□ -2.17
HMGCLP35914 RNU6-976P-201ENST00000516086 111 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AC091144.1-201ENST00000519573 138 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCLP35914 MIR4524B-201ENST00000581569 115 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.49□□□□□ -2.17
HMGCLP35914 AL050343.2-201ENST00000607338 280 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGCLP35914 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AL353997.5-201ENST00000618886 171 ntBASIC1.49□□□□□ -2.17
HMGCLP35914 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 snoU2-30.2-201ENST00000362805 70 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 Y_RNA.146-201ENST00000363549 102 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 RNU6-112P-201ENST00000363599 104 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 SNORA63D-201ENST00000364359 132 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 Y_RNA.287-201ENST00000364853 94 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 Y_RNA.595-201ENST00000410403 105 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 RPL23AP50-201ENST00000434149 455 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGCLP35914 PCNPP5-201ENST00000452246 481 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 RNU6-1012P-201ENST00000516606 109 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 RNU1-117P-201ENST00000517041 158 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 AC144568.1-201ENST00000520139 137 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 AP002001.1-203ENST00000534002 267 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGCLP35914 AL645939.4-201ENST00000604495 135 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 AC103810.8-201ENST00000607347 118 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 MIR4272-201ENST00000635924 64 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 U6.108-201ENST00000637764 58 ntBASIC1.48□□□□□ -2.17
HMGCLP35914 Y_RNA.61-201ENST00000362835 102 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 RNU6-727P-201ENST00000363592 107 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 RNU6-457P-201ENST00000363999 107 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 RNU4-13P-201ENST00000364019 141 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 RNU1-96P-201ENST00000364163 162 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 SNORA17.3-201ENST00000391159 129 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 AC008134.1-201ENST00000420943 193 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 AC010409.1-201ENST00000487382 476 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 AP005660.1-201ENST00000522972 293 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 AL080274.1-201ENST00000605565 220 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 AC083806.3-201ENST00000614016 455 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 AC006435.5-201ENST00000624486 112 ntBASIC1.47□□□□□ -2.17
HMGCLP35914 RNU6-862P-201ENST00000362804 105 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 RNU6-1019P-201ENST00000364424 107 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 RNU6-1240P-201ENST00000365155 104 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 Y_RNA.431-201ENST00000384086 102 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 Y_RNA.579-201ENST00000390939 94 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 RNU6-482P-201ENST00000391068 107 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 MRPL35P1-201ENST00000404272 572 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 RNU6-57P-201ENST00000411348 103 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 AC022028.1-201ENST00000412054 408 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 AC114482.1-201ENST00000418010 247 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGCLP35914 RNU7-87P-201ENST00000459343 62 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 RPS26P45-201ENST00000471748 340 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGCLP35914 SNORA40.9-201ENST00000515895 93 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 Y_RNA.675-201ENST00000516389 149 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 RNU4-77P-201ENST00000516692 156 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 RNU7-128P-201ENST00000517247 62 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 AC018448.1-201ENST00000552843 316 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGCLP35914 MIR3684-201ENST00000579779 74 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 AC010205.1-201ENST00000616668 449 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 uc_338.22-201ENST00000622722 187 ntBASIC1.46□□□□□ -2.18
HMGCLP35914 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
HMGCLP35914 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.45□□□□□ -2.18
HMGCLP35914 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.45□□□□□ -2.18
HMGCLP35914 SNORD114-7-201ENST00000362520 77 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 Y_RNA.27-201ENST00000362540 103 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 Y_RNA.535-201ENST00000384612 99 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 MIR515-2-201ENST00000384883 83 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 MIR515-1-201ENST00000384884 83 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 SNORD12B-201ENST00000410433 91 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 RNU6-475P-201ENST00000516073 104 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 RNU6-1041P-201ENST00000516254 102 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 RNU6-1146P-201ENST00000516282 102 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 AC022868.1-201ENST00000517767 391 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 AC024995.1-201ENST00000523014 93 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.45□□□□□ -2.18
HMGCLP35914 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.45□□□□□ -2.18
HMGCLP35914 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 VN1R91P-201ENST00000594377 169 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 AC022432.1-201ENST00000595739 310 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 U2.1-201ENST00000618978 145 ntBASIC1.45□□□□□ -2.18
HMGCLP35914 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
HMGCLP35914 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HMGCLP35914 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
HMGCLP35914 AL161722.3-201ENST00000605789 2983 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms