Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 Y_RNA.332-201ENST00000365271 113 ntBASIC4.16□□□□□ -1.74
CLCN1P35523 CD24P4-201ENST00000382840 243 ntBASIC4.16□□□□□ -1.74
CLCN1P35523 AC018634.1-201ENST00000437554 401 ntBASIC4.16□□□□□ -1.74
CLCN1P35523 HMGN1P7-201ENST00000491722 313 ntBASIC4.16□□□□□ -1.74
CLCN1P35523 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.16□□□□□ -1.74
CLCN1P35523 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.16□□□□□ -1.74
CLCN1P35523 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN1P35523 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.16□□□□□ -1.74
CLCN1P35523 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.16□□□□□ -1.74
CLCN1P35523 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN1P35523 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN1P35523 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CLCN1P35523 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.15□□□□□ -1.74
CLCN1P35523 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCN1P35523 RNA5SP383-201ENST00000362934 120 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 RNA5SP42-201ENST00000364278 115 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 SNORA1-201ENST00000384107 130 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 MIR1263-201ENST00000408324 86 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 AC093578.1-201ENST00000415219 368 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 AC060773.1-201ENST00000421698 310 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCN1P35523 SNORA64.4-201ENST00000516632 81 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 RNA5SP196-201ENST00000625967 102 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 AC091152.2-201ENST00000591628 2569 ntBASIC4.15□□□□□ -1.75
CLCN1P35523 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCN1P35523 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CLCN1P35523 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN1P35523 MIR199A2-201ENST00000385289 110 ntBASIC4.14□□□□□ -1.75
CLCN1P35523 SNORA12.1-201ENST00000390873 148 ntBASIC4.14□□□□□ -1.75
CLCN1P35523 RNU11-5P-201ENST00000391216 129 ntBASIC4.14□□□□□ -1.75
CLCN1P35523 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCN1P35523 SNRPGP10-201ENST00000432323 225 ntBASIC4.14□□□□□ -1.75
CLCN1P35523 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCN1P35523 MIR2276-201ENST00000516886 89 ntBASIC4.14□□□□□ -1.75
CLCN1P35523 RNU6-1270P-201ENST00000517128 108 ntBASIC4.14□□□□□ -1.75
CLCN1P35523 AC007229.1-201ENST00000590455 412 ntBASIC4.14□□□□□ -1.75
CLCN1P35523 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN1P35523 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCN1P35523 MIR450A1-201ENST00000362262 91 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 RNU1-96P-201ENST00000364163 162 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 SNORA62.3-201ENST00000365110 153 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 RNU6-628P-201ENST00000410675 107 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 AL117339.2-201ENST00000430475 180 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 AL031737.1-201ENST00000450125 223 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 CYCSP35-201ENST00000451978 304 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCN1P35523 SEM1P1-201ENST00000506694 209 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 RNA5SP208-201ENST00000516156 78 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 RNU6-1291P-201ENST00000516591 104 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 MIR6500-201ENST00000622700 86 ntBASIC4.13□□□□□ -1.75
CLCN1P35523 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.13□□□□□ -1.75
CLCN1P35523 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CLCN1P35523 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.12□□□□□ -1.75
CLCN1P35523 SNORD56.3-201ENST00000363507 71 ntBASIC4.12□□□□□ -1.75
CLCN1P35523 Y_RNA.253-201ENST00000364562 112 ntBASIC4.12□□□□□ -1.75
CLCN1P35523 MIR670-201ENST00000390142 98 ntBASIC4.12□□□□□ -1.75
CLCN1P35523 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN1P35523 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCN1P35523 RNU7-99P-201ENST00000516271 62 ntBASIC4.12□□□□□ -1.75
CLCN1P35523 SNORA72.7-201ENST00000516349 94 ntBASIC4.12□□□□□ -1.75
CLCN1P35523 AC023632.4-201ENST00000517783 191 ntBASIC4.12□□□□□ -1.75
CLCN1P35523 MAPK10-322ENST00000641485 4530 ntBASIC4.12□□□□□ -1.75
CLCN1P35523 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN1P35523 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCN1P35523 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLCN1P35523 SPRR2C-201ENST00000290702 219 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 snoU2-30.2-201ENST00000362805 70 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 RNA5SP283-201ENST00000365604 119 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 RNU6-1292P-201ENST00000383856 107 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 RNU6-32P-201ENST00000383948 107 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 RNU6-13P-201ENST00000384248 107 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 SNORD61-201ENST00000384252 73 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 Y_RNA.495-201ENST00000384435 112 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 RNU6-12P-201ENST00000384604 107 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 RNU6-41P-201ENST00000384741 107 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 HMGN1P18-201ENST00000457642 277 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 AC011406.1-201ENST00000512440 370 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 IGHVIII-67-2-201ENST00000519849 88 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 uc_338.28-201ENST00000612082 187 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 AC022149.2-201ENST00000621061 203 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 MAPK10-362ENST00000641864 4484 ntBASIC4.11□□□□□ -1.75
CLCN1P35523 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CLCN1P35523 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLCN1P35523 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CLCN1P35523 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN1P35523 AC008264.2-201ENST00000610193 3731 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 MIR340-201ENST00000362125 95 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 Y_RNA.116-201ENST00000363292 103 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 MIR95-201ENST00000385072 81 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 SNORD72-201ENST00000390994 80 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 snoU13.22-201ENST00000459428 104 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 AC023141.11-201ENST00000508864 202 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 Y_RNA.694-201ENST00000516677 117 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 SNORA48.11-201ENST00000517015 89 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 AC245166.1-201ENST00000521012 253 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 IGKV1-22-201ENST00000524313 326 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN1P35523 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms