Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RNU1-96P-201ENST00000364163 162 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 Y_RNA.287-201ENST00000364853 94 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 SNORA75.4-201ENST00000391278 119 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 USMG5P1-201ENST00000425964 177 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 HMGN2P34-201ENST00000437647 269 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.21□□□□□ -2.22
HOXA9P31269 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AC093852.1-201ENST00000503587 266 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 RNU6-120P-201ENST00000516077 103 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 SCARNA16.2-201ENST00000516520 172 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AC025647.1-201ENST00000517879 253 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AC105029.1-201ENST00000520250 669 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.21□□□□□ -2.22
HOXA9P31269 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 7SK.7-201ENST00000603504 247 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AL353149.1-201ENST00000610667 244 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AL121890.5-201ENST00000620848 304 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AC006001.4-201ENST00000622243 395 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AL359697.1-201ENST00000624879 587 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 TPTEP1-208ENST00000636884 213 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 AC099654.14-201ENST00000638599 341 ntBASIC1.21□□□□□ -2.22
HOXA9P31269 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HOXA9P31269 RNU6-280P-201ENST00000364145 104 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 RNU6-793P-201ENST00000384233 104 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 Y_RNA.474-201ENST00000384341 102 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 RNU1-139P-201ENST00000391307 165 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 MIR190B-201ENST00000401119 79 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 RNU6-1304P-201ENST00000411374 106 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 EIF1P2-201ENST00000428233 350 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AL353997.1-201ENST00000432936 108 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 U8.22-201ENST00000459141 133 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 RNU6-221P-201ENST00000459541 99 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AC114982.1-201ENST00000469402 321 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AC093303.1-201ENST00000514549 295 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 Y_RNA.706-201ENST00000516933 99 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 RNA5SP437-201ENST00000517249 129 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AC005668.1-201ENST00000571142 476 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 MIR5695-201ENST00000579717 85 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AC100812.1-201ENST00000607622 580 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AL355073.2-201ENST00000612106 557 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 snoZ196.1-201ENST00000625269 89 ntBASIC1.2□□□□□ -2.22
HOXA9P31269 AC010615.1-201ENST00000594254 1764 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 snoU2-30.2-201ENST00000362805 70 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 RNU6-414P-201ENST00000363705 104 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 Y_RNA.179-201ENST00000363844 90 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 RNU6-1019P-201ENST00000364424 107 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 Y_RNA.557-201ENST00000384680 107 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 RNU6-417P-201ENST00000384712 107 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 RNA5SP467-201ENST00000391274 118 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.19□□□□□ -2.22
HOXA9P31269 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXA9P31269 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXA9P31269 PRDX4P1-201ENST00000507189 574 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 RNU6-1114P-201ENST00000516022 107 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 AL121579.1-201ENST00000555129 305 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 FRG2DP-202ENST00000566967 323 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXA9P31269 AC125232.2-201ENST00000592457 143 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 AC010999.1-201ENST00000611856 324 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.19□□□□□ -2.22
HOXA9P31269 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.19□□□□□ -2.22
HOXA9P31269 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.19□□□□□ -2.22
HOXA9P31269 MIR6767-201ENST00000637302 66 ntBASIC1.19□□□□□ -2.22
HOXA9P31269 U3.8-201ENST00000363675 217 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 RNU6-271P-201ENST00000363858 105 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 SNORA63D-201ENST00000364359 132 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 Y_RNA.303-201ENST00000364998 94 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 MIR329-1-201ENST00000385028 80 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HOXA9P31269 CST2P1-201ENST00000425770 87 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 USP9YP16-201ENST00000430287 407 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 AC098614.3-201ENST00000438957 440 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 RPS4XP11-201ENST00000446897 772 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 NDUFB4P10-201ENST00000452541 359 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 USP9YP23-201ENST00000455085 407 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.18□□□□□ -2.22
HOXA9P31269 AC091144.1-201ENST00000519573 138 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 APOOP3-201ENST00000536787 586 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 AC069114.2-201ENST00000604699 304 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 AL357075.2-201ENST00000614906 189 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 PISRT1.1-201ENST00000616930 107 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 AC099654.5-201ENST00000636479 350 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 AL669831.3-213ENST00000636676 183 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 U6.108-201ENST00000637764 58 ntBASIC1.18□□□□□ -2.22
HOXA9P31269 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HOXA9P31269 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 RNU6-1188P-201ENST00000363795 107 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 Y_RNA.364-201ENST00000365532 101 ntBASIC1.17□□□□□ -2.22
HOXA9P31269 RNU6-1145P-201ENST00000384246 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms