Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MIR338-201ENST00000636369 67 ntBASIC1.46□□□□□ -2.18
PTPN4P29074 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
PTPN4P29074 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
PTPN4P29074 Y_RNA.226-201ENST00000364337 114 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RNU6-1001P-201ENST00000411265 100 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC004965.1-201ENST00000413033 213 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC016909.1-201ENST00000415916 166 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC245047.4-201ENST00000433189 144 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RPL23AP50-201ENST00000434149 455 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 U8.22-201ENST00000459141 133 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RNU6-221P-201ENST00000459541 99 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RPL26P26-201ENST00000480251 434 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.45□□□□□ -2.18
PTPN4P29074 AL117351.2-201ENST00000513571 157 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RNU6-120P-201ENST00000516077 103 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 RNU6-875P-201ENST00000516488 106 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC025647.1-201ENST00000517879 253 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC084364.2-201ENST00000546924 395 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC093023.1-201ENST00000547375 507 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 MIR548S-201ENST00000581352 82 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AL132765.2-201ENST00000610812 351 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC126177.8-201ENST00000618339 1015 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC006001.4-201ENST00000622243 395 ntBASIC1.45□□□□□ -2.18
PTPN4P29074 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.44□□□□□ -2.18
PTPN4P29074 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.44□□□□□ -2.18
PTPN4P29074 MTND5P35-201ENST00000557537 1720 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 AL391987.6-201ENST00000305671 199 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 RNU6-1240P-201ENST00000365155 104 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 RNU6-890P-201ENST00000384121 107 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 RNY3P14-201ENST00000384309 102 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 Y_RNA.557-201ENST00000384680 107 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 MIR1185-2-201ENST00000408687 86 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.44□□□□□ -2.18
PTPN4P29074 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.44□□□□□ -2.18
PTPN4P29074 AC092423.1-201ENST00000430165 186 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 HMGN2P34-201ENST00000437647 269 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.44□□□□□ -2.18
PTPN4P29074 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.44□□□□□ -2.18
PTPN4P29074 MTCO3P10-201ENST00000455912 772 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 RNU7-87P-201ENST00000459343 62 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.44□□□□□ -2.18
PTPN4P29074 Y_RNA.673-201ENST00000516306 88 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 Y_RNA.683-201ENST00000516508 93 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 FRG2DP-202ENST00000566967 323 ntBASIC1.44□□□□□ -2.18
PTPN4P29074 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
PTPN4P29074 ICE2P2-201ENST00000483823 2787 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 RNU6-1266P-201ENST00000362794 105 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 RNU6-99P-201ENST00000364721 107 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 Y_RNA.387-201ENST00000383918 102 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 RNU6-1297P-201ENST00000384415 104 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MIR329-1-201ENST00000385028 80 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 RNU11-5P-201ENST00000391216 129 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MTCYBP4-201ENST00000401524 249 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 COX6CP10-201ENST00000416832 224 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.43□□□□□ -2.18
PTPN4P29074 snoU13.27-201ENST00000459278 104 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 AC022493.2-201ENST00000506122 481 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 FGF7P4-201ENST00000509595 295 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 CYCSP23-201ENST00000519781 313 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 AL161670.1-201ENST00000554348 137 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
PTPN4P29074 PRR13P7-201ENST00000605538 430 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MIR1244-1-201ENST00000612829 85 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 AC025253.1-201ENST00000613623 543 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 AL121890.5-201ENST00000620848 304 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MIR8063-201ENST00000621930 81 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MIR1244-3-201ENST00000635744 85 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MIR1244-2-201ENST00000636449 85 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MIR1244-4-202ENST00000636813 85 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 MIR1302-1-201ENST00000637932 143 ntBASIC1.43□□□□□ -2.18
PTPN4P29074 RNA5SP361-201ENST00000362686 118 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 Y_RNA.287-201ENST00000364853 94 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 Y_RNA.358-201ENST00000365491 99 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 SNORD116-29-201ENST00000384516 83 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 RNA5SP323-201ENST00000391094 133 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
PTPN4P29074 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 MTND5P20-201ENST00000448677 143 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 RPL30P15-201ENST00000457129 321 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 Y_RNA.653-201ENST00000459091 95 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 RNU6-507P-201ENST00000516045 100 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 AC091144.1-201ENST00000519573 138 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 AC104260.1-201ENST00000616660 539 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 MTND4LP32-201ENST00000636111 270 ntBASIC1.42□□□□□ -2.18
PTPN4P29074 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PTPN4P29074 SNORA33-201ENST00000363664 130 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 RNU6-271P-201ENST00000363858 105 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 Y_RNA.263-201ENST00000364659 114 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 Y_RNA.327-201ENST00000365201 102 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 RNU6-1145P-201ENST00000384246 107 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 Y_RNA.577-201ENST00000384794 101 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 RNU6-1009P-201ENST00000390996 107 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms