Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC114982.1-201ENST00000469402 321 ntBASIC2.74□□□□□ -1.97
XPAP23025 RPS27AP9-201ENST00000477681 438 ntBASIC2.74□□□□□ -1.97
XPAP23025 AC107393.1-201ENST00000512403 346 ntBASIC2.74□□□□□ -1.97
XPAP23025 CBX3P4-201ENST00000538909 354 ntBASIC2.74□□□□□ -1.97
XPAP23025 AC079600.2-201ENST00000550076 130 ntBASIC2.74□□□□□ -1.97
XPAP23025 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.74□□□□□ -1.97
XPAP23025 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.74□□□□□ -1.97
XPAP23025 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.74□□□□□ -1.97
XPAP23025 AC134026.1-201ENST00000623249 2239 ntBASIC2.73□□□□□ -1.97
XPAP23025 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.73□□□□□ -1.97
XPAP23025 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
XPAP23025 MIR340-201ENST00000362125 95 ntBASIC2.73□□□□□ -1.97
XPAP23025 Y_RNA.150-201ENST00000363562 102 ntBASIC2.73□□□□□ -1.97
XPAP23025 RNU6-209P-201ENST00000384118 107 ntBASIC2.73□□□□□ -1.97
XPAP23025 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
XPAP23025 AL357139.1-201ENST00000407792 426 ntBASIC2.73□□□□□ -1.97
XPAP23025 AC016909.1-201ENST00000415916 166 ntBASIC2.73□□□□□ -1.97
XPAP23025 AL121890.1-201ENST00000435457 205 ntBASIC2.73□□□□□ -1.97
XPAP23025 AC093259.1-201ENST00000509755 300 ntBASIC2.73□□□□□ -1.97
XPAP23025 AC096725.1-201ENST00000514266 313 ntBASIC2.73□□□□□ -1.97
XPAP23025 Y_RNA.700-201ENST00000516806 100 ntBASIC2.73□□□□□ -1.97
XPAP23025 RNU6-826P-201ENST00000516827 104 ntBASIC2.73□□□□□ -1.97
XPAP23025 RNU6-182P-201ENST00000516970 105 ntBASIC2.73□□□□□ -1.97
XPAP23025 RNU6-667P-201ENST00000517186 102 ntBASIC2.73□□□□□ -1.97
XPAP23025 AC022559.1-201ENST00000520905 205 ntBASIC2.73□□□□□ -1.97
XPAP23025 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.73□□□□□ -1.97
XPAP23025 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
XPAP23025 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.73□□□□□ -1.97
XPAP23025 AC073349.3-201ENST00000617616 186 ntBASIC2.73□□□□□ -1.97
XPAP23025 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
XPAP23025 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.72□□□□□ -1.97
XPAP23025 Y_RNA.510-201ENST00000384511 114 ntBASIC2.72□□□□□ -1.97
XPAP23025 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
XPAP23025 Y_RNA.793-201ENST00000411222 111 ntBASIC2.72□□□□□ -1.97
XPAP23025 MTCO1P44-201ENST00000441935 243 ntBASIC2.72□□□□□ -1.97
XPAP23025 AL138752.1-201ENST00000452964 351 ntBASIC2.72□□□□□ -1.97
XPAP23025 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.72□□□□□ -1.97
XPAP23025 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.72□□□□□ -1.97
XPAP23025 RNU6-948P-201ENST00000516374 107 ntBASIC2.72□□□□□ -1.97
XPAP23025 AC025647.1-201ENST00000517879 253 ntBASIC2.72□□□□□ -1.97
XPAP23025 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
XPAP23025 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.72□□□□□ -1.97
XPAP23025 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.97
XPAP23025 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.71□□□□□ -1.98
XPAP23025 RNU6-923P-201ENST00000364753 107 ntBASIC2.71□□□□□ -1.98
XPAP23025 Y_RNA.308-201ENST00000365043 101 ntBASIC2.71□□□□□ -1.98
XPAP23025 Y_RNA.310-201ENST00000365063 113 ntBASIC2.71□□□□□ -1.98
XPAP23025 Y_RNA.332-201ENST00000365271 113 ntBASIC2.71□□□□□ -1.98
XPAP23025 RNU1-52P-201ENST00000384190 164 ntBASIC2.71□□□□□ -1.98
XPAP23025 RNU6-1235P-201ENST00000384559 107 ntBASIC2.71□□□□□ -1.98
XPAP23025 MIR561-201ENST00000385216 97 ntBASIC2.71□□□□□ -1.98
XPAP23025 RNU6-855P-201ENST00000410395 104 ntBASIC2.71□□□□□ -1.98
XPAP23025 RNU2-52P-201ENST00000410680 190 ntBASIC2.71□□□□□ -1.98
XPAP23025 RPS29P6-201ENST00000438196 145 ntBASIC2.71□□□□□ -1.98
XPAP23025 AC074290.1-201ENST00000448883 135 ntBASIC2.71□□□□□ -1.98
XPAP23025 AL137159.1-201ENST00000452808 512 ntBASIC2.71□□□□□ -1.98
XPAP23025 RNU6-498P-201ENST00000459468 107 ntBASIC2.71□□□□□ -1.98
XPAP23025 COX6CP14-201ENST00000469580 174 ntBASIC2.71□□□□□ -1.98
XPAP23025 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.71□□□□□ -1.98
XPAP23025 AC136628.3-201ENST00000521868 290 ntBASIC2.71□□□□□ -1.98
XPAP23025 AC009127.3-201ENST00000570531 403 ntBASIC2.71□□□□□ -1.98
XPAP23025 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.71□□□□□ -1.98
XPAP23025 AC006023.1-201ENST00000603944 259 ntBASIC2.71□□□□□ -1.98
XPAP23025 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.71□□□□□ -1.98
XPAP23025 AC098479.1-201ENST00000609225 154 ntBASIC2.71□□□□□ -1.98
XPAP23025 FTX_2.1-201ENST00000618816 94 ntBASIC2.71□□□□□ -1.98
XPAP23025 AL365265.1-201ENST00000621045 234 ntBASIC2.71□□□□□ -1.98
XPAP23025 MIR6852-201ENST00000621699 66 ntBASIC2.71□□□□□ -1.98
XPAP23025 AC131280.1-202ENST00000624067 4211 ntBASIC2.71□□□□□ -1.98
XPAP23025 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
XPAP23025 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
XPAP23025 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
XPAP23025 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
XPAP23025 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
XPAP23025 AC062016.1-201ENST00000355719 319 ntBASIC2.7□□□□□ -1.98
XPAP23025 RNA5SP393-201ENST00000363423 117 ntBASIC2.7□□□□□ -1.98
XPAP23025 SNORA25B-201ENST00000365507 128 ntBASIC2.7□□□□□ -1.98
XPAP23025 RNU6-1248P-201ENST00000391096 64 ntBASIC2.7□□□□□ -1.98
XPAP23025 RNU6-493P-201ENST00000391321 108 ntBASIC2.7□□□□□ -1.98
XPAP23025 OOSP1P1-201ENST00000423265 274 ntBASIC2.7□□□□□ -1.98
XPAP23025 RPL23AP7-203ENST00000449021 469 ntBASIC2.7□□□□□ -1.98
XPAP23025 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.7□□□□□ -1.98
XPAP23025 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
XPAP23025 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
XPAP23025 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
XPAP23025 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.7□□□□□ -1.98
XPAP23025 SNORA27.1-201ENST00000362604 124 ntBASIC2.69□□□□□ -1.98
XPAP23025 SNORA67.1-201ENST00000364749 141 ntBASIC2.69□□□□□ -1.98
XPAP23025 Y_RNA.304-201ENST00000365011 112 ntBASIC2.69□□□□□ -1.98
XPAP23025 Y_RNA.341-201ENST00000365341 102 ntBASIC2.69□□□□□ -1.98
XPAP23025 Y_RNA.368-201ENST00000365547 113 ntBASIC2.69□□□□□ -1.98
XPAP23025 SNORD88.1-201ENST00000408684 91 ntBASIC2.69□□□□□ -1.98
XPAP23025 AC123900.1-201ENST00000420390 96 ntBASIC2.69□□□□□ -1.98
XPAP23025 SNORA59A-201ENST00000459326 152 ntBASIC2.69□□□□□ -1.98
XPAP23025 HMGB3P3-201ENST00000510526 400 ntBASIC2.69□□□□□ -1.98
XPAP23025 AP002392.1-201ENST00000537692 208 ntBASIC2.69□□□□□ -1.98
XPAP23025 MIR4308-201ENST00000580634 81 ntBASIC2.69□□□□□ -1.98
XPAP23025 MIR4635-201ENST00000583759 79 ntBASIC2.69□□□□□ -1.98
XPAP23025 AL136360.1-201ENST00000503377 1900 ntBASIC2.69□□□□□ -1.98
XPAP23025 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms