Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 RNU6-498P-201ENST00000459468 107 ntBASIC2.3□□□□□ -2.04
MMP8P22894 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
MMP8P22894 AC025647.1-201ENST00000517879 253 ntBASIC2.3□□□□□ -2.04
MMP8P22894 IGLV3-17-201ENST00000519099 244 ntBASIC2.3□□□□□ -2.04
MMP8P22894 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.3□□□□□ -2.04
MMP8P22894 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
MMP8P22894 MIR3145-201ENST00000580727 82 ntBASIC2.3□□□□□ -2.04
MMP8P22894 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
MMP8P22894 U6.115-201ENST00000636045 103 ntBASIC2.3□□□□□ -2.04
MMP8P22894 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MMP8P22894 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
MMP8P22894 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
MMP8P22894 AC010615.1-201ENST00000594254 1764 ntBASIC2.29□□□□□ -2.04
MMP8P22894 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
MMP8P22894 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.29□□□□□ -2.04
MMP8P22894 RNU4-90P-201ENST00000362773 141 ntBASIC2.29□□□□□ -2.04
MMP8P22894 Y_RNA.237-201ENST00000364439 102 ntBASIC2.29□□□□□ -2.04
MMP8P22894 Y_RNA.383-201ENST00000383855 97 ntBASIC2.29□□□□□ -2.04
MMP8P22894 U3.40-201ENST00000408706 208 ntBASIC2.29□□□□□ -2.04
MMP8P22894 AC016909.1-201ENST00000415916 166 ntBASIC2.29□□□□□ -2.04
MMP8P22894 MRPS10P1-201ENST00000448483 130 ntBASIC2.29□□□□□ -2.04
MMP8P22894 AL139109.1-201ENST00000455491 297 ntBASIC2.29□□□□□ -2.04
MMP8P22894 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.29□□□□□ -2.04
MMP8P22894 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
MMP8P22894 SNORD14A-201ENST00000606526 91 ntBASIC2.29□□□□□ -2.04
MMP8P22894 AP001282.2-201ENST00000616149 309 ntBASIC2.29□□□□□ -2.04
MMP8P22894 AL590240.4-201ENST00000616908 390 ntBASIC2.29□□□□□ -2.04
MMP8P22894 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.29□□□□□ -2.04
MMP8P22894 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MMP8P22894 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
MMP8P22894 Y_RNA.99-201ENST00000363138 105 ntBASIC2.28□□□□□ -2.04
MMP8P22894 SNORA67.1-201ENST00000364749 141 ntBASIC2.28□□□□□ -2.04
MMP8P22894 Y_RNA.288-201ENST00000364854 92 ntBASIC2.28□□□□□ -2.04
MMP8P22894 Y_RNA.329-201ENST00000365209 107 ntBASIC2.28□□□□□ -2.04
MMP8P22894 RNU6-290P-201ENST00000365212 101 ntBASIC2.28□□□□□ -2.04
MMP8P22894 Y_RNA.569-201ENST00000384749 103 ntBASIC2.28□□□□□ -2.04
MMP8P22894 RNU2-38P-201ENST00000410856 79 ntBASIC2.28□□□□□ -2.04
MMP8P22894 AC060773.1-201ENST00000421698 310 ntBASIC2.28□□□□□ -2.04
MMP8P22894 POLR2KP2-201ENST00000438155 177 ntBASIC2.28□□□□□ -2.04
MMP8P22894 AL357134.1-201ENST00000445848 426 ntBASIC2.28□□□□□ -2.04
MMP8P22894 SNORD65B-201ENST00000459126 73 ntBASIC2.28□□□□□ -2.04
MMP8P22894 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.28□□□□□ -2.04
MMP8P22894 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.28□□□□□ -2.04
MMP8P22894 RNU6-436P-201ENST00000516171 114 ntBASIC2.28□□□□□ -2.04
MMP8P22894 RNU6-1338P-201ENST00000516328 91 ntBASIC2.28□□□□□ -2.04
MMP8P22894 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.28□□□□□ -2.04
MMP8P22894 AC087441.2-201ENST00000529141 262 ntBASIC2.28□□□□□ -2.04
MMP8P22894 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.28□□□□□ -2.04
MMP8P22894 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
MMP8P22894 DEFB117-201ENST00000602356 141 ntBASIC2.28□□□□□ -2.04
MMP8P22894 AP000942.4-201ENST00000604811 241 ntBASIC2.28□□□□□ -2.04
MMP8P22894 SDR42E1P4-201ENST00000620894 481 ntBASIC2.28□□□□□ -2.04
MMP8P22894 MIR6132-201ENST00000622083 109 ntBASIC2.28□□□□□ -2.04
MMP8P22894 U6.104-201ENST00000637979 90 ntBASIC2.28□□□□□ -2.04
MMP8P22894 AL159152.1-201ENST00000635019 2587 ntBASIC2.28□□□□□ -2.04
MMP8P22894 SNORD115-30-201ENST00000364117 82 ntBASIC2.27□□□□□ -2.05
MMP8P22894 RNU6-1164P-201ENST00000364428 107 ntBASIC2.27□□□□□ -2.05
MMP8P22894 Y_RNA.243-201ENST00000364481 109 ntBASIC2.27□□□□□ -2.05
MMP8P22894 Y_RNA.556-201ENST00000384677 113 ntBASIC2.27□□□□□ -2.05
MMP8P22894 MIR524-201ENST00000385242 87 ntBASIC2.27□□□□□ -2.05
MMP8P22894 AL355796.1-201ENST00000406706 323 ntBASIC2.27□□□□□ -2.05
MMP8P22894 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
MMP8P22894 Y_RNA.668-201ENST00000516233 93 ntBASIC2.27□□□□□ -2.05
MMP8P22894 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.27□□□□□ -2.05
MMP8P22894 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
MMP8P22894 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP8P22894 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
MMP8P22894 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
MMP8P22894 AL391987.6-201ENST00000305671 199 ntBASIC2.26□□□□□ -2.05
MMP8P22894 RNU6-1266P-201ENST00000362794 105 ntBASIC2.26□□□□□ -2.05
MMP8P22894 RNA5SP493-201ENST00000364115 91 ntBASIC2.26□□□□□ -2.05
MMP8P22894 RNU6-1240P-201ENST00000365155 104 ntBASIC2.26□□□□□ -2.05
MMP8P22894 SNORA20B-201ENST00000384220 132 ntBASIC2.26□□□□□ -2.05
MMP8P22894 RNU6-301P-201ENST00000384277 107 ntBASIC2.26□□□□□ -2.05
MMP8P22894 RNU6-160P-201ENST00000384591 107 ntBASIC2.26□□□□□ -2.05
MMP8P22894 AL031003.1-201ENST00000404229 172 ntBASIC2.26□□□□□ -2.05
MMP8P22894 BX510359.4-201ENST00000423750 193 ntBASIC2.26□□□□□ -2.05
MMP8P22894 SNORD127-201ENST00000458892 86 ntBASIC2.26□□□□□ -2.05
MMP8P22894 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.26□□□□□ -2.05
MMP8P22894 RNU6-1041P-201ENST00000516254 102 ntBASIC2.26□□□□□ -2.05
MMP8P22894 RNU2-34P-201ENST00000516534 121 ntBASIC2.26□□□□□ -2.05
MMP8P22894 RNU6-856P-201ENST00000516959 98 ntBASIC2.26□□□□□ -2.05
MMP8P22894 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.26□□□□□ -2.05
MMP8P22894 AC004817.2-201ENST00000561794 651 ntBASIC2.26□□□□□ -2.05
MMP8P22894 AC062037.2-201ENST00000610137 73 ntBASIC2.26□□□□□ -2.05
MMP8P22894 MIR6895-201ENST00000613497 78 ntBASIC2.26□□□□□ -2.05
MMP8P22894 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
MMP8P22894 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
MMP8P22894 Y_RNA.418-201ENST00000384029 102 ntBASIC2.25□□□□□ -2.05
MMP8P22894 AL356320.1-201ENST00000429616 163 ntBASIC2.25□□□□□ -2.05
MMP8P22894 RNU6-1132P-201ENST00000459214 107 ntBASIC2.25□□□□□ -2.05
MMP8P22894 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
MMP8P22894 AC023157.2-201ENST00000540596 141 ntBASIC2.25□□□□□ -2.05
MMP8P22894 RPL21P9-201ENST00000556149 474 ntBASIC2.25□□□□□ -2.05
MMP8P22894 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.25□□□□□ -2.05
MMP8P22894 AC012433.1-201ENST00000588916 398 ntBASIC2.25□□□□□ -2.05
MMP8P22894 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.25□□□□□ -2.05
MMP8P22894 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
MMP8P22894 AC127459.3-201ENST00000624328 466 ntBASIC2.25□□□□□ -2.05
MMP8P22894 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms