Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
CCL1P22362 Y_RNA.354-201ENST00000365448 111 ntBASIC0.08□□□□□ -2.4
CCL1P22362 RNU5A-2P-201ENST00000384337 116 ntBASIC0.08□□□□□ -2.4
CCL1P22362 Y_RNA.560-201ENST00000384689 102 ntBASIC0.08□□□□□ -2.4
CCL1P22362 MIR520C-201ENST00000385005 87 ntBASIC0.08□□□□□ -2.4
CCL1P22362 MIR153-2-201ENST00000385225 87 ntBASIC0.08□□□□□ -2.4
CCL1P22362 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
CCL1P22362 RNU6-584P-201ENST00000410350 95 ntBASIC0.08□□□□□ -2.4
CCL1P22362 ZNF885P-201ENST00000420174 1098 ntBASIC0.08□□□□□ -2.4
CCL1P22362 MTCO2P18-201ENST00000457151 658 ntBASIC0.08□□□□□ -2.4
CCL1P22362 HMGN2P26-201ENST00000463169 339 ntBASIC0.08□□□□□ -2.4
CCL1P22362 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.08□□□□□ -2.4
CCL1P22362 CCDC34P1-201ENST00000507441 517 ntBASIC0.08□□□□□ -2.4
CCL1P22362 MTND1P22-201ENST00000510572 951 ntBASIC0.08□□□□□ -2.4
CCL1P22362 AC074133.1-201ENST00000515696 183 ntBASIC0.08□□□□□ -2.4
CCL1P22362 RN7SKP164-201ENST00000516138 266 ntBASIC0.08□□□□□ -2.4
CCL1P22362 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.08□□□□□ -2.4
CCL1P22362 AC016957.1-201ENST00000534895 309 ntBASIC0.08□□□□□ -2.4
CCL1P22362 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.08□□□□□ -2.4
CCL1P22362 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.08□□□□□ -2.4
CCL1P22362 AC120024.3-201ENST00000603167 156 ntBASIC0.08□□□□□ -2.4
CCL1P22362 AC104695.3-201ENST00000604052 296 ntBASIC0.08□□□□□ -2.4
CCL1P22362 AC072046.2-201ENST00000618366 268 ntBASIC0.08□□□□□ -2.4
CCL1P22362 RNU6-873P-201ENST00000363833 107 ntBASIC0.07□□□□□ -2.4
CCL1P22362 RNU6-1297P-201ENST00000384415 104 ntBASIC0.07□□□□□ -2.4
CCL1P22362 RNU6-297P-201ENST00000384636 107 ntBASIC0.07□□□□□ -2.4
CCL1P22362 RNU6-376P-201ENST00000384731 106 ntBASIC0.07□□□□□ -2.4
CCL1P22362 MIR32-201ENST00000384965 70 ntBASIC0.07□□□□□ -2.4
CCL1P22362 MIR15B-201ENST00000385045 98 ntBASIC0.07□□□□□ -2.4
CCL1P22362 MIR520G-201ENST00000385064 90 ntBASIC0.07□□□□□ -2.4
CCL1P22362 RNA5SP511-201ENST00000410487 115 ntBASIC0.07□□□□□ -2.4
CCL1P22362 RNU6-248P-201ENST00000410720 107 ntBASIC0.07□□□□□ -2.4
CCL1P22362 MTCYBP8-201ENST00000422855 651 ntBASIC0.07□□□□□ -2.4
CCL1P22362 CYCSP46-201ENST00000423569 204 ntBASIC0.07□□□□□ -2.4
CCL1P22362 RPS20P10-201ENST00000451209 253 ntBASIC0.07□□□□□ -2.4
CCL1P22362 TPTE2P5-203ENST00000458118 728 ntBASIC0.07□□□□□ -2.4
CCL1P22362 SNORA74.3-201ENST00000517108 154 ntBASIC0.07□□□□□ -2.4
CCL1P22362 MIR4300-201ENST00000581016 96 ntBASIC0.07□□□□□ -2.4
CCL1P22362 AC100830.2-201ENST00000581636 240 ntBASIC0.07□□□□□ -2.4
CCL1P22362 MIR4424-201ENST00000585257 86 ntBASIC0.07□□□□□ -2.4
CCL1P22362 AC087683.1-201ENST00000591187 441 ntBASIC0.07□□□□□ -2.4
CCL1P22362 AL357078.3-201ENST00000607528 618 ntBASIC0.07□□□□□ -2.4
CCL1P22362 AL008636.1-201ENST00000625038 1018 ntBASIC0.07□□□□□ -2.4
CCL1P22362 SNORA25.3-201ENST00000363205 127 ntBASIC0.06□□□□□ -2.4
CCL1P22362 RNU6-541P-201ENST00000384709 110 ntBASIC0.06□□□□□ -2.4
CCL1P22362 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.06□□□□□ -2.4
CCL1P22362 MTCO2P11-201ENST00000431069 680 ntBASIC0.06□□□□□ -2.4
CCL1P22362 Z98949.2-201ENST00000440996 144 ntBASIC0.06□□□□□ -2.4
CCL1P22362 AC073415.1-201ENST00000449240 153 ntBASIC0.06□□□□□ -2.4
CCL1P22362 PCNPP5-201ENST00000452246 481 ntBASIC0.06□□□□□ -2.4
CCL1P22362 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.06□□□□□ -2.4
CCL1P22362 RNU6-1278P-201ENST00000516130 107 ntBASIC0.06□□□□□ -2.4
CCL1P22362 MIR3913-1-201ENST00000577744 102 ntBASIC0.06□□□□□ -2.4
CCL1P22362 AC022709.1-201ENST00000615967 87 ntBASIC0.06□□□□□ -2.4
CCL1P22362 AC015726.2-201ENST00000620112 122 ntBASIC0.06□□□□□ -2.4
CCL1P22362 AC006504.8-201ENST00000621046 635 ntBASIC0.06□□□□□ -2.4
CCL1P22362 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
CCL1P22362 FGF7P2-201ENST00000332473 296 ntBASIC0.05□□□□□ -2.4
CCL1P22362 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
CCL1P22362 RNU6-727P-201ENST00000363592 107 ntBASIC0.05□□□□□ -2.4
CCL1P22362 Y_RNA.179-201ENST00000363844 90 ntBASIC0.05□□□□□ -2.4
CCL1P22362 RNU4-41P-201ENST00000364426 143 ntBASIC0.05□□□□□ -2.4
CCL1P22362 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
CCL1P22362 RNY1P8-201ENST00000383970 114 ntBASIC0.05□□□□□ -2.4
CCL1P22362 RNU6-42P-201ENST00000384165 107 ntBASIC0.05□□□□□ -2.4
CCL1P22362 RNY3P9-201ENST00000384727 106 ntBASIC0.05□□□□□ -2.4
CCL1P22362 MIR573-201ENST00000384964 99 ntBASIC0.05□□□□□ -2.4
CCL1P22362 CALM2P3-201ENST00000400429 449 ntBASIC0.05□□□□□ -2.4
CCL1P22362 MTCYBP4-201ENST00000401524 249 ntBASIC0.05□□□□□ -2.4
CCL1P22362 RNU5A-5P-201ENST00000411054 116 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AC091179.3-201ENST00000474761 144 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.05□□□□□ -2.4
CCL1P22362 AC107401.1-201ENST00000503426 685 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AC093303.1-201ENST00000514549 295 ntBASIC0.05□□□□□ -2.4
CCL1P22362 RNU7-43P-201ENST00000516554 64 ntBASIC0.05□□□□□ -2.4
CCL1P22362 RNU6-1291P-201ENST00000516591 104 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.05□□□□□ -2.4
CCL1P22362 PIGPP4-201ENST00000584447 307 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AL078603.1-201ENST00000603824 313 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AC100812.1-201ENST00000607622 580 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AC010999.1-201ENST00000611856 324 ntBASIC0.05□□□□□ -2.4
CCL1P22362 AL158063.1-201ENST00000615349 536 ntBASIC0.05□□□□□ -2.4
CCL1P22362 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.05□□□□□ -2.4
CCL1P22362 MIR924-201ENST00000638017 53 ntBASIC0.05□□□□□ -2.4
CCL1P22362 SNORD14.1-201ENST00000365609 90 ntBASIC0.04□□□□□ -2.4
CCL1P22362 AL590002.1-201ENST00000406554 418 ntBASIC0.04□□□□□ -2.4
CCL1P22362 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.04□□□□□ -2.4
CCL1P22362 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.04□□□□□ -2.4
CCL1P22362 MRPS10P2-201ENST00000431226 381 ntBASIC0.04□□□□□ -2.4
CCL1P22362 AL353572.1-201ENST00000442490 417 ntBASIC0.04□□□□□ -2.4
CCL1P22362 AC092436.3-201ENST00000511788 257 ntBASIC0.04□□□□□ -2.4
CCL1P22362 RNU7-41P-201ENST00000515917 61 ntBASIC0.04□□□□□ -2.4
CCL1P22362 RNU6-1129P-201ENST00000515964 104 ntBASIC0.04□□□□□ -2.4
CCL1P22362 RNA5SP436-201ENST00000516020 115 ntBASIC0.04□□□□□ -2.4
CCL1P22362 RNA5SP220-201ENST00000516298 104 ntBASIC0.04□□□□□ -2.4
CCL1P22362 RNU6-1116P-201ENST00000517269 99 ntBASIC0.04□□□□□ -2.4
CCL1P22362 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.04□□□□□ -2.4
CCL1P22362 MIR5692C1-201ENST00000585309 91 ntBASIC0.04□□□□□ -2.4
CCL1P22362 AL158209.2-201ENST00000619266 216 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms