Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 RNU6-1001P-201ENST00000411265 100 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1D1P20393 AL356379.1-201ENST00000414105 126 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 RNY3P15-201ENST00000516297 97 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.07□□□□□ -2.08
NR1D1P20393 AC026271.5-201ENST00000577873 130 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 MIR5006-201ENST00000583027 110 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 MIR4781-201ENST00000585250 76 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 AP000942.3-201ENST00000603702 160 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 SNORD11B-201ENST00000607707 90 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.07□□□□□ -2.08
NR1D1P20393 AC240442.1-201ENST00000616055 283 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 MTND5P35-201ENST00000557537 1720 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 AC009487.4-201ENST00000624969 3585 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 WWP1P1-201ENST00000466609 2769 ntBASIC2.07□□□□□ -2.08
NR1D1P20393 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NR1D1P20393 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
NR1D1P20393 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NR1D1P20393 Y_RNA.64-201ENST00000362845 102 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 Y_RNA.105-201ENST00000363182 111 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 RNU6-944P-201ENST00000364023 107 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 Y_RNA.222-201ENST00000364264 102 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 SNORA12-201ENST00000391162 147 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 SNORA11.4-201ENST00000408823 129 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 RNU6-121P-201ENST00000410525 99 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 RNU2-32P-201ENST00000411193 191 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.06□□□□□ -2.08
NR1D1P20393 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 LINC01399-202ENST00000458450 244 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.06□□□□□ -2.08
NR1D1P20393 AC022616.8-201ENST00000533569 253 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.06□□□□□ -2.08
NR1D1P20393 MIR4659A-201ENST00000580269 81 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 AC078899.2-201ENST00000595282 212 ntBASIC2.06□□□□□ -2.08
NR1D1P20393 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.06□□□□□ -2.08
NR1D1P20393 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.06□□□□□ -2.08
NR1D1P20393 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NR1D1P20393 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
NR1D1P20393 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NR1D1P20393 RNA5SP361-201ENST00000362686 118 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 RNU6-234P-201ENST00000365229 104 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 Y_RNA.396-201ENST00000383949 103 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 Y_RNA.462-201ENST00000384268 102 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 Y_RNA.518-201ENST00000384552 113 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 MIR518A2-201ENST00000384966 87 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 MIR300-201ENST00000401138 83 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 NDUFB4P10-201ENST00000452541 359 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 RPS27P21-201ENST00000486977 252 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 RNU6-408P-201ENST00000515910 100 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 RNU5F-4P-201ENST00000516581 114 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 AP003733.2-201ENST00000529409 171 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.05□□□□□ -2.08
NR1D1P20393 MZT1P2-201ENST00000604387 248 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.05□□□□□ -2.08
NR1D1P20393 AC068205.3-201ENST00000636385 468 ntBASIC2.05□□□□□ -2.08
NR1D1P20393 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 Y_RNA.376-201ENST00000365638 108 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.04□□□□□ -2.08
NR1D1P20393 Y_RNA.461-201ENST00000384263 103 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 MT-TW-201ENST00000387382 68 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 SNORD115-46-201ENST00000390982 71 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 MIR1302-6-201ENST00000408466 90 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 U3.40-201ENST00000408706 208 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
NR1D1P20393 AC091179.3-201ENST00000474761 144 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 DEFB131C-201ENST00000528817 165 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 AC110588.1-201ENST00000559699 137 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 LINC02555-201ENST00000563933 1951 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.04□□□□□ -2.08
NR1D1P20393 AC136932.1-201ENST00000574771 208 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.04□□□□□ -2.08
NR1D1P20393 AC062037.2-201ENST00000610137 73 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 U6.104-201ENST00000637979 90 ntBASIC2.04□□□□□ -2.08
NR1D1P20393 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NR1D1P20393 Y_RNA.230-201ENST00000364348 109 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 RNU6-1310P-201ENST00000384153 107 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 SNORD63-201ENST00000384262 68 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 SNORA67.2-201ENST00000384300 149 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 MIR586-201ENST00000385035 97 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 AL033519.2-201ENST00000403958 392 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 AL390729.2-201ENST00000416137 156 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 RPL21P38-201ENST00000418090 167 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 AC096920.1-201ENST00000423991 241 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 AL445305.1-201ENST00000432577 575 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.03□□□□□ -2.08
NR1D1P20393 RPL26P26-201ENST00000480251 434 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.03□□□□□ -2.08
NR1D1P20393 SNORA40.9-201ENST00000515895 93 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 RNU6-1098P-201ENST00000516772 96 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 RNU6-295P-201ENST00000516901 104 ntBASIC2.03□□□□□ -2.08
NR1D1P20393 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms