Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR6128-201ENST00000615528 109 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 AC091812.1-201ENST00000432235 1948 ntBASIC1.2□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.89-201ENST00000363031 102 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 RNU1-22P-201ENST00000363334 158 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.436-201ENST00000384097 102 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.554-201ENST00000384672 102 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.19□□□□□ -2.22
HLA-DPA1P20036 AC093023.1-201ENST00000547375 507 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPA1P20036 MIR4781-201ENST00000585250 76 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DPA1P20036 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 MIR6079-201ENST00000635807 62 ntBASIC1.19□□□□□ -2.22
HLA-DPA1P20036 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HLA-DPA1P20036 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DPA1P20036 RNU6-222P-201ENST00000362438 107 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.48-201ENST00000362710 103 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.106-201ENST00000363189 100 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.573-201ENST00000384763 105 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 RNU11-5P-201ENST00000391216 129 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 RNU1-139P-201ENST00000391307 165 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.18□□□□□ -2.22
HLA-DPA1P20036 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 RNU7-172P-201ENST00000517125 64 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 RPL21P9-201ENST00000556149 474 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 AC091895.1-201ENST00000624494 256 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 MIR3662-201ENST00000637030 95 ntBASIC1.18□□□□□ -2.22
HLA-DPA1P20036 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.18□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.157-201ENST00000363638 102 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.164-201ENST00000363709 102 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.265-201ENST00000364677 108 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 RNU4-12P-201ENST00000365233 139 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.450-201ENST00000384198 113 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 RNU6-842P-201ENST00000384269 107 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HLA-DPA1P20036 RNA5SP118-201ENST00000410385 109 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 RNU6-1148P-201ENST00000410992 104 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 MTCO3P19-201ENST00000415864 321 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AC016907.1-201ENST00000419483 435 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AL591704.2-201ENST00000421658 181 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.17□□□□□ -2.22
HLA-DPA1P20036 RAB28P5-201ENST00000427490 651 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 MTND1P17-201ENST00000448961 204 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AC097462.1-201ENST00000514125 324 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AC090617.3-201ENST00000573670 475 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AC093913.1-201ENST00000614178 329 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 AL133216.2-202ENST00000634512 349 ntBASIC1.17□□□□□ -2.22
HLA-DPA1P20036 RNU6-199P-201ENST00000362954 107 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 Y_RNA.295-201ENST00000364918 102 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 AL139396.1-201ENST00000421137 167 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.16□□□□□ -2.22
HLA-DPA1P20036 AC046134.1-201ENST00000514454 666 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 RNA5SP168-201ENST00000516642 112 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 CBX3P8-201ENST00000532412 525 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.16□□□□□ -2.22
HLA-DPA1P20036 AL121579.1-201ENST00000555129 305 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 AC080013.6-201ENST00000606185 215 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 GHRLOS.1-201ENST00000610995 70 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.16□□□□□ -2.22
HLA-DPA1P20036 MTND5P16-201ENST00000460269 1703 ntBASIC1.15□□□□□ -2.22
HLA-DPA1P20036 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
HLA-DPA1P20036 SNORA20B-201ENST00000384220 132 ntBASIC1.15□□□□□ -2.23
HLA-DPA1P20036 MTATP6P26-201ENST00000445926 662 ntBASIC1.15□□□□□ -2.23
HLA-DPA1P20036 SNORD5.1-201ENST00000458800 75 ntBASIC1.15□□□□□ -2.23
HLA-DPA1P20036 AC105758.1-201ENST00000506038 399 ntBASIC1.15□□□□□ -2.23
HLA-DPA1P20036 SNORA31.2-201ENST00000516019 134 ntBASIC1.15□□□□□ -2.23
HLA-DPA1P20036 SNORA31.4-201ENST00000516049 129 ntBASIC1.15□□□□□ -2.23
HLA-DPA1P20036 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.15□□□□□ -2.23
HLA-DPA1P20036 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HLA-DPA1P20036 RNU6-53P-201ENST00000365367 106 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 MTCYBP4-201ENST00000401524 249 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 AL355796.1-201ENST00000406706 323 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 RNU6-1001P-201ENST00000411265 100 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 CALM2P4-201ENST00000430810 426 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 UQCRBP2-201ENST00000447827 297 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.14□□□□□ -2.23
HLA-DPA1P20036 RPS23P4-201ENST00000487908 423 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 Y_RNA.676-201ENST00000516393 96 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 RNU2-56P-201ENST00000516826 190 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 MIR4790-201ENST00000577799 79 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 MIR3684-201ENST00000579779 74 ntBASIC1.14□□□□□ -2.23
HLA-DPA1P20036 Y_RNA.267-201ENST00000364679 109 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 Y_RNA.301-201ENST00000364990 103 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 RNU6-407P-201ENST00000365280 104 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 RNU6-1264P-201ENST00000383891 107 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 MIR562-201ENST00000384894 95 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 MIR653-201ENST00000385279 96 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 RNU6-910P-201ENST00000390844 107 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 AC048334.1-201ENST00000477975 159 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 AC093852.1-201ENST00000503587 266 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 AC018710.1-201ENST00000506509 158 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 RNU6-947P-201ENST00000516264 106 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 RNU7-28P-201ENST00000516759 62 ntBASIC1.13□□□□□ -2.23
HLA-DPA1P20036 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms