Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 Y_RNA.310-201ENST00000365063 113 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 SNORA20B-201ENST00000384220 132 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 Y_RNA.571-201ENST00000384753 98 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 MIR95-201ENST00000385072 81 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 MIR873-201ENST00000401120 77 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 AL355796.1-201ENST00000406706 323 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.9□□□□□ -1.95
PTPN1P18031 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.9□□□□□ -1.95
PTPN1P18031 RNU6-1278P-201ENST00000516130 107 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 RNU6-948P-201ENST00000516374 107 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 SUMO2P18-201ENST00000518873 252 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPN1P18031 MIR4319-201ENST00000577285 85 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 MIR4672-201ENST00000583126 81 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 MIR3605-201ENST00000583214 100 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 AC006023.1-201ENST00000603944 259 ntBASIC2.9□□□□□ -1.95
PTPN1P18031 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.9□□□□□ -1.95
PTPN1P18031 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PTPN1P18031 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.9□□□□□ -1.95
PTPN1P18031 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.89□□□□□ -1.95
PTPN1P18031 RNU6-899P-201ENST00000363947 107 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 RNA5SP240-201ENST00000365355 128 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.89□□□□□ -1.95
PTPN1P18031 AL121890.1-201ENST00000435457 205 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.89□□□□□ -1.95
PTPN1P18031 RPL39P40-201ENST00000445481 146 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 RPL23AP7-203ENST00000449021 469 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 HMGN2P18-201ENST00000450680 270 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 SNORD109B-201ENST00000458961 67 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 SNORD109A-201ENST00000459128 67 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.89□□□□□ -1.95
PTPN1P18031 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.89□□□□□ -1.95
PTPN1P18031 RNA5SP490-201ENST00000517141 136 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.89□□□□□ -1.95
PTPN1P18031 AC108206.1-201ENST00000570186 4159 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN1P18031 AC134026.1-201ENST00000623249 2239 ntBASIC2.89□□□□□ -1.95
PTPN1P18031 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN1P18031 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN1P18031 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTPN1P18031 Y_RNA.293-201ENST00000364908 93 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 RNU6-418P-201ENST00000384035 107 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AL355497.1-201ENST00000406262 551 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 RNU2-52P-201ENST00000410680 190 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AC063976.3-201ENST00000426849 329 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AL392103.1-201ENST00000447000 198 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AC108938.1-201ENST00000451204 136 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 SNORD65B-201ENST00000459126 73 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AC091021.1-201ENST00000468051 388 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AC010598.1-201ENST00000510378 103 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 Y_RNA.703-201ENST00000516846 111 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 SNORA48.11-201ENST00000517015 89 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.88□□□□□ -1.95
PTPN1P18031 MIR3133-201ENST00000583157 78 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AL356280.1-201ENST00000603614 379 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 AC021753.1-201ENST00000635724 168 ntBASIC2.88□□□□□ -1.95
PTPN1P18031 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PTPN1P18031 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PTPN1P18031 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
PTPN1P18031 AC062016.1-201ENST00000355719 319 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 SNORA27.1-201ENST00000362604 124 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU1-23P-201ENST00000363361 144 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU6-271P-201ENST00000363858 105 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 Y_RNA.238-201ENST00000364441 102 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU6-1235P-201ENST00000384559 107 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU2-2P-201ENST00000410396 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU2-63P-201ENST00000410792 194 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNA5SP184-201ENST00000411071 108 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
PTPN1P18031 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
PTPN1P18031 RNU7-141P-201ENST00000459304 62 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU6-498P-201ENST00000459468 107 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.87□□□□□ -1.95
PTPN1P18031 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.87□□□□□ -1.95
PTPN1P18031 RPL12P50-201ENST00000603116 116 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU2-4P-201ENST00000606190 192 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.15-201ENST00000611544 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.16-201ENST00000613119 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.12-201ENST00000613778 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.9-201ENST00000615427 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.11-201ENST00000616345 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.2-201ENST00000616535 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.3-201ENST00000617785 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.19-201ENST00000618602 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 RNU2-1-201ENST00000618664 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.6-201ENST00000619225 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.5-201ENST00000619465 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 U2.10-201ENST00000620268 191 ntBASIC2.87□□□□□ -1.95
PTPN1P18031 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PTPN1P18031 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PTPN1P18031 AC068700.1-201ENST00000565862 3754 ntBASIC2.86□□□□□ -1.95
PTPN1P18031 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.86□□□□□ -1.95
PTPN1P18031 Y_RNA.121-201ENST00000363309 113 ntBASIC2.86□□□□□ -1.95
PTPN1P18031 RNU6-743P-201ENST00000364151 106 ntBASIC2.86□□□□□ -1.95
PTPN1P18031 Y_RNA.506-201ENST00000384494 102 ntBASIC2.86□□□□□ -1.95
PTPN1P18031 RNU6-125P-201ENST00000384505 107 ntBASIC2.86□□□□□ -1.95
PTPN1P18031 HSPE1P13-201ENST00000451143 297 ntBASIC2.86□□□□□ -1.95
PTPN1P18031 RPS20P10-201ENST00000451209 253 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms