Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 COTL1P1-201ENST00000422309 375 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 RPS29P21-201ENST00000496272 170 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.56□□□□□ -1.84
HOXD8P13378 AC008885.1-201ENST00000514930 301 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.56□□□□□ -1.84
HOXD8P13378 RPL23AP91-201ENST00000569211 455 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 MIR3121-201ENST00000579680 77 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 MIR2681-201ENST00000581814 105 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 AL670379.3-201ENST00000605040 251 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 AL033523.1-201ENST00000605153 153 ntBASIC3.56□□□□□ -1.84
HOXD8P13378 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HOXD8P13378 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXD8P13378 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HOXD8P13378 SNORD31B-201ENST00000364977 69 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 RNU6-418P-201ENST00000384035 107 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 AL158147.1-201ENST00000443970 75 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 ATP5EP1-201ENST00000510257 156 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 SNORD33.1-201ENST00000516213 88 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 AC015720.1-201ENST00000565251 277 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 MIR3945-201ENST00000581853 98 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 UBL5P2-201ENST00000583788 219 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXD8P13378 uc_338.25-201ENST00000613756 156 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 MIR6715A-201ENST00000615929 79 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 AL121890.5-201ENST00000620848 304 ntBASIC3.55□□□□□ -1.84
HOXD8P13378 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HOXD8P13378 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD8P13378 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
HOXD8P13378 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HOXD8P13378 MTND5P32-201ENST00000560711 1802 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 Y_RNA.114-201ENST00000363265 113 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 RNU6-944P-201ENST00000364023 107 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 RNU6-978P-201ENST00000364371 103 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 DYNLT3P1-201ENST00000378574 347 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 RNU6-484P-201ENST00000384016 107 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 MIR548A3-201ENST00000385297 97 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 RN7SKP220-201ENST00000410611 288 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 AC107083.1-201ENST00000439643 279 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 Y_RNA.690-201ENST00000516603 95 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 RNU6-844P-201ENST00000517175 102 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 RNU6-586P-201ENST00000517265 104 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 AC131055.1-201ENST00000584626 316 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 AL929325.1-201ENST00000603096 117 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 AC006435.5-201ENST00000624486 112 ntBASIC3.54□□□□□ -1.84
HOXD8P13378 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD8P13378 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXD8P13378 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
HOXD8P13378 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXD8P13378 Y_RNA.203-201ENST00000364106 102 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 SNORA26-201ENST00000391286 122 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 RNU6-1077P-201ENST00000410506 102 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 RNU6-589P-201ENST00000516485 107 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 AC025647.1-201ENST00000517879 253 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 MIR3613-201ENST00000579844 87 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD8P13378 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD8P13378 AL021707.8-201ENST00000609428 183 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 uc_338.4-201ENST00000616635 176 ntBASIC3.53□□□□□ -1.84
HOXD8P13378 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXD8P13378 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXD8P13378 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXD8P13378 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD8P13378 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HOXD8P13378 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD8P13378 RNU6-1240P-201ENST00000365155 104 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 RNU6-1235P-201ENST00000384559 107 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 ARF4P2-201ENST00000430209 526 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXD8P13378 RNU6-498P-201ENST00000459468 107 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 AC010531.2-201ENST00000465012 153 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 SNORA18.4-201ENST00000516440 124 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 RNU6-965P-201ENST00000516721 96 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 AL160236.1-201ENST00000556317 195 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 MIR5047-201ENST00000579212 100 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 AC105245.1-201ENST00000581934 244 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 RMST_8.1-201ENST00000610287 165 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 MIR4679-1-201ENST00000637619 75 ntBASIC3.52□□□□□ -1.85
HOXD8P13378 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXD8P13378 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 AC010733.2-201ENST00000589496 5702 ntBASIC3.51□□□□□ -1.85
HOXD8P13378 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 Y_RNA.91-201ENST00000363042 107 ntBASIC3.51□□□□□ -1.85
HOXD8P13378 Y_RNA.621-201ENST00000411065 96 ntBASIC3.51□□□□□ -1.85
HOXD8P13378 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXD8P13378 RNA5SP153-201ENST00000516498 76 ntBASIC3.51□□□□□ -1.85
HOXD8P13378 Y_RNA.694-201ENST00000516677 117 ntBASIC3.51□□□□□ -1.85
HOXD8P13378 JPX_2.1-201ENST00000614161 69 ntBASIC3.51□□□□□ -1.85
HOXD8P13378 UCA1.1-201ENST00000620952 75 ntBASIC3.51□□□□□ -1.85
HOXD8P13378 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXD8P13378 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXD8P13378 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HOXD8P13378 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXD8P13378 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms