Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MIR8063-201ENST00000621930 81 ntBASIC1.54□□□□□ -2.16
KRT3P12035 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
KRT3P12035 SNORA72.2-201ENST00000365028 127 ntBASIC1.53□□□□□ -2.16
KRT3P12035 SNORA4.2-201ENST00000365313 147 ntBASIC1.53□□□□□ -2.16
KRT3P12035 Y_RNA.529-201ENST00000384586 119 ntBASIC1.53□□□□□ -2.16
KRT3P12035 Y_RNA.577-201ENST00000384794 101 ntBASIC1.53□□□□□ -2.16
KRT3P12035 MIR764-201ENST00000390811 85 ntBASIC1.53□□□□□ -2.16
KRT3P12035 RNA5SP109-201ENST00000391010 116 ntBASIC1.53□□□□□ -2.16
KRT3P12035 SNORD12B-201ENST00000410433 91 ntBASIC1.53□□□□□ -2.16
KRT3P12035 RN7SKP51-201ENST00000410781 304 ntBASIC1.53□□□□□ -2.16
KRT3P12035 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.53□□□□□ -2.16
KRT3P12035 MTCO2P27-201ENST00000420740 428 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AC096644.2-201ENST00000429278 159 ntBASIC1.53□□□□□ -2.16
KRT3P12035 snoU13.9-201ENST00000458927 103 ntBASIC1.53□□□□□ -2.16
KRT3P12035 SNORD65B-201ENST00000459126 73 ntBASIC1.53□□□□□ -2.16
KRT3P12035 RNU6-625P-201ENST00000459412 107 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AC010469.2-201ENST00000496412 480 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AC025465.3-201ENST00000510570 311 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AC144568.1-201ENST00000520139 137 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AC018448.1-201ENST00000552843 316 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AC015720.1-201ENST00000565251 277 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.53□□□□□ -2.16
KRT3P12035 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AL353149.1-201ENST00000610667 244 ntBASIC1.53□□□□□ -2.16
KRT3P12035 AL132765.2-201ENST00000610812 351 ntBASIC1.53□□□□□ -2.16
KRT3P12035 RNU6-661P-201ENST00000362409 107 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNU6-1145P-201ENST00000384246 107 ntBASIC1.52□□□□□ -2.17
KRT3P12035 MIR515-2-201ENST00000384883 83 ntBASIC1.52□□□□□ -2.17
KRT3P12035 MIR515-1-201ENST00000384884 83 ntBASIC1.52□□□□□ -2.17
KRT3P12035 MIR628-201ENST00000385229 95 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNA5SP213-201ENST00000391031 106 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
KRT3P12035 HSPE1P24-201ENST00000450782 238 ntBASIC1.52□□□□□ -2.17
KRT3P12035 NDUFB4P10-201ENST00000452541 359 ntBASIC1.52□□□□□ -2.17
KRT3P12035 AC112492.4-201ENST00000456549 352 ntBASIC1.52□□□□□ -2.17
KRT3P12035 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.52□□□□□ -2.17
KRT3P12035 SNORA40.9-201ENST00000515895 93 ntBASIC1.52□□□□□ -2.17
KRT3P12035 Y_RNA.661-201ENST00000516003 99 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNU6-277P-201ENST00000516272 106 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNA5SP481-201ENST00000516814 122 ntBASIC1.52□□□□□ -2.17
KRT3P12035 Y_RNA.702-201ENST00000516843 96 ntBASIC1.52□□□□□ -2.17
KRT3P12035 RNU7-4P-201ENST00000516961 62 ntBASIC1.52□□□□□ -2.17
KRT3P12035 CYCSP23-201ENST00000519781 313 ntBASIC1.52□□□□□ -2.17
KRT3P12035 MIR7843-201ENST00000622274 79 ntBASIC1.52□□□□□ -2.17
KRT3P12035 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
KRT3P12035 ZNF72P-201ENST00000425869 1908 ntBASIC1.51□□□□□ -2.17
KRT3P12035 Y_RNA.58-201ENST00000362807 102 ntBASIC1.51□□□□□ -2.17
KRT3P12035 Y_RNA.70-201ENST00000362886 110 ntBASIC1.51□□□□□ -2.17
KRT3P12035 Y_RNA.154-201ENST00000363624 102 ntBASIC1.51□□□□□ -2.17
KRT3P12035 RNY3P1-201ENST00000365085 102 ntBASIC1.51□□□□□ -2.17
KRT3P12035 RNU6-407P-201ENST00000365280 104 ntBASIC1.51□□□□□ -2.17
KRT3P12035 RNY3-201ENST00000365484 102 ntBASIC1.51□□□□□ -2.17
KRT3P12035 RNU6-318P-201ENST00000384283 103 ntBASIC1.51□□□□□ -2.17
KRT3P12035 RNY4P36-201ENST00000391116 96 ntBASIC1.51□□□□□ -2.17
KRT3P12035 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
KRT3P12035 AC010154.1-201ENST00000425857 269 ntBASIC1.51□□□□□ -2.17
KRT3P12035 TOMM22P2-201ENST00000430735 237 ntBASIC1.51□□□□□ -2.17
KRT3P12035 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.51□□□□□ -2.17
KRT3P12035 Y_RNA.632-201ENST00000459189 102 ntBASIC1.51□□□□□ -2.17
KRT3P12035 RNU6-408P-201ENST00000515910 100 ntBASIC1.51□□□□□ -2.17
KRT3P12035 Y_RNA.718-201ENST00000517110 102 ntBASIC1.51□□□□□ -2.17
KRT3P12035 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
KRT3P12035 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
KRT3P12035 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.51□□□□□ -2.17
KRT3P12035 MIR4438-201ENST00000585271 93 ntBASIC1.51□□□□□ -2.17
KRT3P12035 AC025253.1-201ENST00000613623 543 ntBASIC1.51□□□□□ -2.17
KRT3P12035 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.51□□□□□ -2.17
KRT3P12035 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
KRT3P12035 RNU6-360P-201ENST00000390944 104 ntBASIC1.5□□□□□ -2.17
KRT3P12035 ELOCP21-201ENST00000412558 336 ntBASIC1.5□□□□□ -2.17
KRT3P12035 MRPS18CP6-201ENST00000423587 223 ntBASIC1.5□□□□□ -2.17
KRT3P12035 MTND4P28-201ENST00000426217 387 ntBASIC1.5□□□□□ -2.17
KRT3P12035 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
KRT3P12035 snoU13.23-201ENST00000458863 104 ntBASIC1.5□□□□□ -2.17
KRT3P12035 snoU13.27-201ENST00000459278 104 ntBASIC1.5□□□□□ -2.17
KRT3P12035 RPS26P45-201ENST00000471748 340 ntBASIC1.5□□□□□ -2.17
KRT3P12035 RN7SKP49-201ENST00000516675 260 ntBASIC1.5□□□□□ -2.17
KRT3P12035 RNU6-699P-201ENST00000517081 110 ntBASIC1.5□□□□□ -2.17
KRT3P12035 SUB1P3-201ENST00000564581 315 ntBASIC1.5□□□□□ -2.17
KRT3P12035 AC022432.1-201ENST00000595739 310 ntBASIC1.5□□□□□ -2.17
KRT3P12035 RNU6-1264P-201ENST00000383891 107 ntBASIC1.49□□□□□ -2.17
KRT3P12035 RNY3P14-201ENST00000384309 102 ntBASIC1.49□□□□□ -2.17
KRT3P12035 RPL21P1-201ENST00000399532 476 ntBASIC1.49□□□□□ -2.17
KRT3P12035 Y_RNA.592-201ENST00000410274 109 ntBASIC1.49□□□□□ -2.17
KRT3P12035 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.49□□□□□ -2.17
KRT3P12035 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.49□□□□□ -2.17
KRT3P12035 FTH1P12-201ENST00000432137 551 ntBASIC1.49□□□□□ -2.17
KRT3P12035 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.49□□□□□ -2.17
KRT3P12035 AC010598.1-201ENST00000510378 103 ntBASIC1.49□□□□□ -2.17
KRT3P12035 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.49□□□□□ -2.17
KRT3P12035 AC093027.1-201ENST00000546698 429 ntBASIC1.49□□□□□ -2.17
KRT3P12035 AC015712.3-201ENST00000559380 164 ntBASIC1.49□□□□□ -2.17
KRT3P12035 MIR4303-201ENST00000581299 66 ntBASIC1.49□□□□□ -2.17
KRT3P12035 AC087588.2-201ENST00000617667 426 ntBASIC1.49□□□□□ -2.17
KRT3P12035 AC112487.2-201ENST00000637950 304 ntBASIC1.49□□□□□ -2.17
KRT3P12035 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRT3P12035 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
KRT3P12035 ICE2P2-201ENST00000483823 2787 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms