Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DOAP06340 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DOAP06340 AC091179.1-201ENST00000461606 579 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DOAP06340 RNU6-344P-201ENST00000516635 111 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 SCARNA11.3-201ENST00000517276 130 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 MTND5P41-201ENST00000517498 206 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DOAP06340 MIR3199-1-201ENST00000582434 88 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DOAP06340 AL670379.2-201ENST00000604983 252 ntBASIC2.75□□□□□ -1.97
HLA-DOAP06340 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DOAP06340 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DOAP06340 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-486P-201ENST00000363116 107 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 Y_RNA.170-201ENST00000363746 110 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-944P-201ENST00000364023 107 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 Y_RNA.233-201ENST00000364407 101 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-746P-201ENST00000384112 109 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-1310P-201ENST00000384153 107 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-804P-201ENST00000384286 107 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-763P-201ENST00000390865 106 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-346P-201ENST00000516288 111 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 RNU6-1098P-201ENST00000516772 96 ntBASIC2.74□□□□□ -1.97
HLA-DOAP06340 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DOAP06340 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DOAP06340 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DOAP06340 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DOAP06340 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DOAP06340 Y_RNA.8-201ENST00000362353 102 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 RNU6-801P-201ENST00000364087 105 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 SNORD115-30-201ENST00000364117 82 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 SNORD32B-201ENST00000364460 84 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 AL031003.1-201ENST00000404229 172 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 RPS15AP28-201ENST00000435088 386 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOAP06340 RNU6-1278P-201ENST00000516130 107 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 RNU6-406P-201ENST00000516470 107 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DOAP06340 AL713866.2-201ENST00000603579 219 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 AC072026.1-201ENST00000605023 201 ntBASIC2.73□□□□□ -1.97
HLA-DOAP06340 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DOAP06340 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
HLA-DOAP06340 AC026241.1-201ENST00000517873 2142 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DOAP06340 RNU6-1305P-201ENST00000364353 104 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 SNORA68.1-201ENST00000364537 132 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 Y_RNA.304-201ENST00000365011 112 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 RNU6-1274P-201ENST00000384557 107 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 SNORA19-201ENST00000384737 128 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HLA-DOAP06340 SNORA26.5-201ENST00000391215 123 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 RNU6-1212P-201ENST00000517023 104 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 IGKV3-31-201ENST00000523109 329 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 MRPS18CP4-201ENST00000535821 231 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 AC006380.1-201ENST00000603598 186 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.72□□□□□ -1.97
HLA-DOAP06340 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DOAP06340 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
HLA-DOAP06340 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HLA-DOAP06340 AC134026.1-201ENST00000623249 2239 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 AC080128.1-201ENST00000474389 1917 ntBASIC2.72□□□□□ -1.97
HLA-DOAP06340 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.71□□□□□ -1.97
HLA-DOAP06340 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DOAP06340 Y_RNA.172-201ENST00000363765 102 ntBASIC2.71□□□□□ -1.98
HLA-DOAP06340 RNU4-10P-201ENST00000364383 140 ntBASIC2.71□□□□□ -1.98
HLA-DOAP06340 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 AL357139.1-201ENST00000407792 426 ntBASIC2.71□□□□□ -1.98
HLA-DOAP06340 TRIAP1P1-201ENST00000427062 225 ntBASIC2.71□□□□□ -1.98
HLA-DOAP06340 snoU13.26-201ENST00000459452 105 ntBASIC2.71□□□□□ -1.98
HLA-DOAP06340 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DOAP06340 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 Y_RNA.662-201ENST00000516028 97 ntBASIC2.71□□□□□ -1.98
HLA-DOAP06340 SCARNA3-201ENST00000517097 143 ntBASIC2.71□□□□□ -1.98
HLA-DOAP06340 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DOAP06340 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
HLA-DOAP06340 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DOAP06340 Y_RNA.262-201ENST00000364641 102 ntBASIC2.7□□□□□ -1.98
HLA-DOAP06340 Y_RNA.572-201ENST00000384757 98 ntBASIC2.7□□□□□ -1.98
HLA-DOAP06340 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DOAP06340 RNU5E-9P-201ENST00000411164 104 ntBASIC2.7□□□□□ -1.98
HLA-DOAP06340 SEM1P1-201ENST00000506694 209 ntBASIC2.7□□□□□ -1.98
HLA-DOAP06340 SUMO2P18-201ENST00000518873 252 ntBASIC2.7□□□□□ -1.98
HLA-DOAP06340 AC007536.1-201ENST00000533382 349 ntBASIC2.7□□□□□ -1.98
HLA-DOAP06340 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DOAP06340 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DOAP06340 U6.115-201ENST00000636045 103 ntBASIC2.7□□□□□ -1.98
HLA-DOAP06340 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DOAP06340 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DOAP06340 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DOAP06340 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DOAP06340 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DOAP06340 MIR21-201ENST00000362134 72 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms