Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 MIR487A-201ENST00000385009 80 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 MIR325-201ENST00000385260 98 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 SNORA40-201ENST00000388090 126 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 RNU6-239P-201ENST00000390990 99 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 RNU6-1197P-201ENST00000391183 107 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 RN7SKP61-201ENST00000410642 295 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 RPL26P27-201ENST00000414397 437 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.66□□□□□ -1.98
COL3A1P02461 HMGN2P30-201ENST00000423237 256 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 BTF3P11-201ENST00000426582 477 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.66□□□□□ -1.98
COL3A1P02461 RPS15AP5-201ENST00000436276 388 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 SEPT7P4-201ENST00000437076 306 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 AC003989.2-201ENST00000440224 169 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 RNU6-717P-201ENST00000459076 104 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 AC091179.1-201ENST00000461606 579 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 SNORD116-25-201ENST00000516517 92 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 SUMO2P18-201ENST00000518873 252 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 AL359881.1-201ENST00000602916 267 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 AL357075.2-201ENST00000614906 189 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 U2.21-201ENST00000637295 81 ntBASIC2.66□□□□□ -1.98
COL3A1P02461 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 Y_RNA.101-201ENST00000363154 102 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 RNU6-778P-201ENST00000363269 103 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 RNA5SP205-201ENST00000364653 136 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 Y_RNA.353-201ENST00000365440 108 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 Y_RNA.412-201ENST00000384001 104 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 MIR1287-201ENST00000408492 90 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 RNU6-257P-201ENST00000410238 98 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.65□□□□□ -1.98
COL3A1P02461 AC138623.1-201ENST00000418060 216 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 AC012306.1-201ENST00000423267 114 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 AC244670.1-201ENST00000436879 112 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 RPS29P11-201ENST00000496507 171 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.65□□□□□ -1.98
COL3A1P02461 RNU6-155P-201ENST00000516347 100 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 RNU6-426P-201ENST00000516464 97 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.65□□□□□ -1.98
COL3A1P02461 MIR548X2-201ENST00000579776 100 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 MIR5089-201ENST00000580047 84 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 AC006380.1-201ENST00000603598 186 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 AL008718.3-201ENST00000610217 321 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 MIR6134-201ENST00000617606 109 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.65□□□□□ -1.98
COL3A1P02461 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
COL3A1P02461 AC099654.7-201ENST00000635788 2127 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
COL3A1P02461 Y_RNA.796-201ENST00000364268 102 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 Y_RNA.273-201ENST00000364703 102 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 Y_RNA.799-201ENST00000364992 102 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 RNU6-1280P-201ENST00000365211 107 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 RNU4-17P-201ENST00000365598 141 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 RNU6-217P-201ENST00000384164 104 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 MIR320B2-201ENST00000408479 138 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 RNU2-54P-201ENST00000410299 190 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 RPS26P42-201ENST00000413485 326 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 TOMM22P1-201ENST00000418578 312 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.65□□□□□ -1.99
COL3A1P02461 WWP1P1-201ENST00000466609 2769 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 AL121594.1-201ENST00000475906 575 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 Y_RNA.797-201ENST00000515977 94 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 NACAP3-201ENST00000552100 481 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 PRELID2P1-201ENST00000552837 301 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 AC009127.3-201ENST00000570531 403 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 MIR3145-201ENST00000580727 82 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.65□□□□□ -1.99
COL3A1P02461 AC010332.2-201ENST00000613083 1904 ntBASIC2.65□□□□□ -1.99
COL3A1P02461 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.65□□□□□ -1.99
COL3A1P02461 AC005336.3-201ENST00000623833 2679 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 RNU6-1272P-201ENST00000362776 107 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 RNU6-245P-201ENST00000384020 107 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 MIR9-3-201ENST00000385084 90 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 MIR513C-201ENST00000401352 84 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 FTH1P15-201ENST00000406984 280 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 EBAG9P1-201ENST00000418955 543 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 RAB28P5-201ENST00000427490 651 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 RPL26P9-201ENST00000457466 433 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 AC007215.1-201ENST00000464893 276 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.64□□□□□ -1.99
COL3A1P02461 AC091932.3-201ENST00000624223 323 ntBASIC2.64□□□□□ -1.99
COL3A1P02461 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
COL3A1P02461 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
COL3A1P02461 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
COL3A1P02461 AL356292.1-201ENST00000283110 373 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RNU6-1285P-201ENST00000363480 105 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 SNORA36A-201ENST00000384221 132 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RNU6-793P-201ENST00000384233 104 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RNU6-376P-201ENST00000384731 106 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RNA5SP390-201ENST00000410191 113 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RNU6-1199P-201ENST00000411249 104 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 ELOCP21-201ENST00000412558 336 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RPL30P13-201ENST00000418873 348 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.63□□□□□ -1.99
COL3A1P02461 snoU13.6-201ENST00000458785 104 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RPL30P12-201ENST00000474666 353 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RPL23AP70-201ENST00000483361 460 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 RPL30P5-201ENST00000494923 336 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 SCARNA17.1-201ENST00000516211 143 ntBASIC2.63□□□□□ -1.99
COL3A1P02461 SCARNA17.2-201ENST00000516334 143 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms