Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORD11B-201ENST00000607707 90 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 AL096861.1-201ENST00000610899 123 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 AC007014.2-201ENST00000615581 479 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 OR5AK4P-201ENST00000635912 903 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 AC100810.6-201ENST00000638068 285 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 MIR103A2-201ENST00000362154 78 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNU6-245P-201ENST00000384020 107 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AL663109.1-201ENST00000411498 844 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 SSR1P2-201ENST00000415208 787 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 MTCYBP10-201ENST00000424905 650 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AC009961.2-201ENST00000435771 251 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RPS29P8-201ENST00000445109 171 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.1□□□□□ -2.39
COL1A1P02452 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.1□□□□□ -2.39
COL1A1P02452 RPL39P5-202ENST00000512505 151 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 SNORA68.3-201ENST00000515906 83 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
COL1A1P02452 MIR3192-201ENST00000584920 77 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AC017083.3-201ENST00000609955 700 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AL391834.2-201ENST00000609982 546 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 TUSC7.1-201ENST00000610969 165 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AP002371.2-201ENST00000624450 503 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 MTND5P16-201ENST00000460269 1703 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
COL1A1P02452 Y_RNA.123-201ENST00000363338 102 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNU6-1327P-201ENST00000365302 105 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNU6-456P-201ENST00000384493 107 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNU6-606P-201ENST00000384721 111 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 SNORD73A-201ENST00000386062 65 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNA5SP482-201ENST00000391269 118 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNU6-195P-201ENST00000411352 109 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.1□□□□□ -2.39
COL1A1P02452 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.1□□□□□ -2.39
COL1A1P02452 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.1□□□□□ -2.39
COL1A1P02452 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.1□□□□□ -2.39
COL1A1P02452 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
COL1A1P02452 ZNF114P1-201ENST00000453500 292 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 snoU13.25-201ENST00000458945 104 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 SNORD65B-201ENST00000459126 73 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 UBE2V1P12-201ENST00000503954 474 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RNU6-58P-201ENST00000517143 103 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.1□□□□□ -2.39
COL1A1P02452 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.1□□□□□ -2.39
COL1A1P02452 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.1□□□□□ -2.39
COL1A1P02452 FRG2DP-202ENST00000566967 323 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 MIR4438-201ENST00000585271 93 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AC245014.2-201ENST00000603689 287 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 AC246785.4-201ENST00000605374 287 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 RMST_3.1-201ENST00000611651 109 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 SCARNA4-201ENST00000629045 128 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 MIR371B-201ENST00000638082 66 ntBASIC0.1□□□□□ -2.39
COL1A1P02452 MIR103A1-201ENST00000362165 78 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 RNU6-833P-201ENST00000363486 107 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 RNU6-1317P-201ENST00000364582 104 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 Y_RNA.551-201ENST00000384661 102 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 MIR620-201ENST00000385232 95 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 RNU6-903P-201ENST00000391270 109 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 MIR891A-201ENST00000401237 79 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 DAP3P1-201ENST00000441522 278 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AP000870.1-201ENST00000472927 406 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 RPL23AP75-201ENST00000491601 451 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.09□□□□□ -2.4
COL1A1P02452 RNU2-56P-201ENST00000516826 190 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 RNU6-430P-201ENST00000517078 107 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AP001372.4-201ENST00000524889 472 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 RAC1P9-201ENST00000604990 392 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AC122133.1-201ENST00000613964 233 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AC139792.3-201ENST00000623525 224 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AC006435.5-201ENST00000624486 112 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AC009161.2-201ENST00000624626 138 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AC008873.1-201ENST00000625051 138 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 MIR6079-201ENST00000635807 62 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 AL390237.1-201ENST00000404226 1415 ntBASIC0.09□□□□□ -2.4
COL1A1P02452 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
COL1A1P02452 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 MIR1-1-201ENST00000362147 71 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 Y_RNA.35-201ENST00000362601 101 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 MIR513B-201ENST00000385136 84 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 SNORD105-201ENST00000386910 85 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 SNX3P1X-201ENST00000414887 175 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.08□□□□□ -2.4
COL1A1P02452 HMGN2P22-201ENST00000427588 175 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.08□□□□□ -2.4
COL1A1P02452 AC010469.2-201ENST00000496412 480 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 RNU6-311P-201ENST00000516224 102 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 RNU6-341P-201ENST00000516973 96 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 MTND4LP26-201ENST00000518144 282 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 AL117336.2-201ENST00000602435 335 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 AC087683.2-201ENST00000611384 326 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 AP001506.1-201ENST00000615444 211 ntBASIC0.08□□□□□ -2.4
COL1A1P02452 AC005592.1-201ENST00000566527 1640 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 Y_RNA.100-201ENST00000363141 102 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 SNORD113.3-201ENST00000364630 78 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 Y_RNA.267-201ENST00000364679 109 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 SNORA40.3-201ENST00000390964 122 ntBASIC0.07□□□□□ -2.4
COL1A1P02452 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms