Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC103810.6-201ENST00000606708 136 ntBASIC2.17□□□□□ -2.06
LDLRP01130 RMST_6.1-201ENST00000611980 203 ntBASIC2.17□□□□□ -2.06
LDLRP01130 AC005520.5-201ENST00000613926 164 ntBASIC2.17□□□□□ -2.06
LDLRP01130 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.17□□□□□ -2.06
LDLRP01130 AC137590.2-201ENST00000619709 240 ntBASIC2.17□□□□□ -2.06
LDLRP01130 MIR7111-201ENST00000619751 72 ntBASIC2.17□□□□□ -2.06
LDLRP01130 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.17□□□□□ -2.06
LDLRP01130 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LDLRP01130 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
LDLRP01130 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
LDLRP01130 AC016717.2-201ENST00000609089 5141 ntBASIC2.16□□□□□ -2.06
LDLRP01130 Y_RNA.54-201ENST00000362766 105 ntBASIC2.16□□□□□ -2.06
LDLRP01130 Y_RNA.180-201ENST00000363867 113 ntBASIC2.16□□□□□ -2.06
LDLRP01130 SNORD32B-201ENST00000364460 84 ntBASIC2.16□□□□□ -2.06
LDLRP01130 Y_RNA.297-201ENST00000364950 91 ntBASIC2.16□□□□□ -2.06
LDLRP01130 SNORA25B-201ENST00000365507 128 ntBASIC2.16□□□□□ -2.06
LDLRP01130 RNU6-926P-201ENST00000384075 107 ntBASIC2.16□□□□□ -2.06
LDLRP01130 AL445305.1-201ENST00000432577 575 ntBASIC2.16□□□□□ -2.06
LDLRP01130 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
LDLRP01130 RPL26P26-201ENST00000480251 434 ntBASIC2.16□□□□□ -2.06
LDLRP01130 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
LDLRP01130 SERF1AP1-201ENST00000514575 187 ntBASIC2.16□□□□□ -2.06
LDLRP01130 SNORA4.4-201ENST00000515921 135 ntBASIC2.16□□□□□ -2.06
LDLRP01130 RNU4-71P-201ENST00000516258 113 ntBASIC2.16□□□□□ -2.06
LDLRP01130 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
LDLRP01130 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.16□□□□□ -2.06
LDLRP01130 BX284668.6-201ENST00000606899 438 ntBASIC2.16□□□□□ -2.06
LDLRP01130 AC127459.3-201ENST00000624328 466 ntBASIC2.16□□□□□ -2.06
LDLRP01130 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
LDLRP01130 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.16□□□□□ -2.06
LDLRP01130 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
LDLRP01130 Y_RNA.29-201ENST00000362570 113 ntBASIC2.15□□□□□ -2.07
LDLRP01130 RNU6-281P-201ENST00000384212 103 ntBASIC2.15□□□□□ -2.07
LDLRP01130 RNU6-541P-201ENST00000384709 110 ntBASIC2.15□□□□□ -2.07
LDLRP01130 MIR10B-201ENST00000385011 110 ntBASIC2.15□□□□□ -2.07
LDLRP01130 AC027124.2-201ENST00000428249 105 ntBASIC2.15□□□□□ -2.07
LDLRP01130 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.15□□□□□ -2.07
LDLRP01130 AC005002.2-201ENST00000438228 269 ntBASIC2.15□□□□□ -2.07
LDLRP01130 AC018868.1-201ENST00000491307 315 ntBASIC2.15□□□□□ -2.07
LDLRP01130 AC026436.1-201ENST00000510537 270 ntBASIC2.15□□□□□ -2.07
LDLRP01130 RNU6-667P-201ENST00000517186 102 ntBASIC2.15□□□□□ -2.07
LDLRP01130 AC022616.8-201ENST00000533569 253 ntBASIC2.15□□□□□ -2.07
LDLRP01130 UBL5P4-201ENST00000562584 236 ntBASIC2.15□□□□□ -2.07
LDLRP01130 MIR4423-201ENST00000580922 80 ntBASIC2.15□□□□□ -2.07
LDLRP01130 AC046143.2-201ENST00000609789 160 ntBASIC2.15□□□□□ -2.07
LDLRP01130 MIR1248-201ENST00000629190 106 ntBASIC2.15□□□□□ -2.07
LDLRP01130 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.15□□□□□ -2.07
LDLRP01130 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
LDLRP01130 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.15□□□□□ -2.07
LDLRP01130 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
LDLRP01130 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
LDLRP01130 Y_RNA.200-201ENST00000364018 102 ntBASIC2.14□□□□□ -2.07
LDLRP01130 SNORA18.2-201ENST00000383865 132 ntBASIC2.14□□□□□ -2.07
LDLRP01130 RNU6-886P-201ENST00000384319 105 ntBASIC2.14□□□□□ -2.07
LDLRP01130 MIR153-2-201ENST00000385225 87 ntBASIC2.14□□□□□ -2.07
LDLRP01130 SNORD12B-201ENST00000410433 91 ntBASIC2.14□□□□□ -2.07
LDLRP01130 RNU6-651P-201ENST00000411040 105 ntBASIC2.14□□□□□ -2.07
LDLRP01130 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.14□□□□□ -2.07
LDLRP01130 RPS15AP28-201ENST00000435088 386 ntBASIC2.14□□□□□ -2.07
LDLRP01130 RNU6-1114P-201ENST00000516022 107 ntBASIC2.14□□□□□ -2.07
LDLRP01130 RNU6-406P-201ENST00000516470 107 ntBASIC2.14□□□□□ -2.07
LDLRP01130 CBX3P4-201ENST00000538909 354 ntBASIC2.14□□□□□ -2.07
LDLRP01130 AC011921.3-201ENST00000605540 361 ntBASIC2.14□□□□□ -2.07
LDLRP01130 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.14□□□□□ -2.07
LDLRP01130 U2.14-201ENST00000615943 113 ntBASIC2.14□□□□□ -2.07
LDLRP01130 U4atac.1-201ENST00000618345 95 ntBASIC2.14□□□□□ -2.07
LDLRP01130 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
LDLRP01130 MIR6873-201ENST00000622788 63 ntBASIC2.14□□□□□ -2.07
LDLRP01130 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LDLRP01130 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LDLRP01130 ZNF204P-201ENST00000416749 2397 ntBASIC2.14□□□□□ -2.07
LDLRP01130 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LDLRP01130 RNU6-961P-201ENST00000363893 105 ntBASIC2.13□□□□□ -2.07
LDLRP01130 RNU6-879P-201ENST00000364328 108 ntBASIC2.13□□□□□ -2.07
LDLRP01130 Y_RNA.226-201ENST00000364337 114 ntBASIC2.13□□□□□ -2.07
LDLRP01130 RNU6-290P-201ENST00000365212 101 ntBASIC2.13□□□□□ -2.07
LDLRP01130 MIR329-1-201ENST00000385028 80 ntBASIC2.13□□□□□ -2.07
LDLRP01130 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LDLRP01130 RNU6-159P-201ENST00000391080 106 ntBASIC2.13□□□□□ -2.07
LDLRP01130 MIR1298-201ENST00000408783 112 ntBASIC2.13□□□□□ -2.07
LDLRP01130 RNU4-30P-201ENST00000410245 143 ntBASIC2.13□□□□□ -2.07
LDLRP01130 RPS26P42-201ENST00000413485 326 ntBASIC2.13□□□□□ -2.07
LDLRP01130 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.13□□□□□ -2.07
LDLRP01130 RNU6-58P-201ENST00000517143 103 ntBASIC2.13□□□□□ -2.07
LDLRP01130 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.13□□□□□ -2.07
LDLRP01130 AC018630.3-201ENST00000542637 96 ntBASIC2.13□□□□□ -2.07
LDLRP01130 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
LDLRP01130 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.12□□□□□ -2.07
LDLRP01130 SNORA16B-201ENST00000364674 135 ntBASIC2.12□□□□□ -2.07
LDLRP01130 Y_RNA.319-201ENST00000365138 92 ntBASIC2.12□□□□□ -2.07
LDLRP01130 Y_RNA.446-201ENST00000384178 104 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNU6-1145P-201ENST00000384246 107 ntBASIC2.12□□□□□ -2.07
LDLRP01130 MIR548M-201ENST00000408260 86 ntBASIC2.12□□□□□ -2.07
LDLRP01130 U3.40-201ENST00000408706 208 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNU2-48P-201ENST00000410694 191 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNU6-1001P-201ENST00000411265 100 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNA5SP270-201ENST00000411361 118 ntBASIC2.12□□□□□ -2.07
LDLRP01130 Y_RNA.644-201ENST00000459006 113 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
LDLRP01130 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms