Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.55□□□□□ -2
TOP3BO95985 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.55□□□□□ -2
TOP3BO95985 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
TOP3BO95985 AL034555.1-201ENST00000604816 211 ntBASIC2.55□□□□□ -2
TOP3BO95985 AC004467.1-201ENST00000615678 330 ntBASIC2.55□□□□□ -2
TOP3BO95985 AC091932.3-201ENST00000624223 323 ntBASIC2.55□□□□□ -2
TOP3BO95985 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
TOP3BO95985 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
TOP3BO95985 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TOP3BO95985 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TOP3BO95985 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.54□□□□□ -2
TOP3BO95985 RNU4-80P-201ENST00000363200 141 ntBASIC2.54□□□□□ -2
TOP3BO95985 RNU6-727P-201ENST00000363592 107 ntBASIC2.54□□□□□ -2
TOP3BO95985 Y_RNA.217-201ENST00000364214 105 ntBASIC2.54□□□□□ -2
TOP3BO95985 Y_RNA.233-201ENST00000364407 101 ntBASIC2.54□□□□□ -2
TOP3BO95985 RNU6-923P-201ENST00000364753 107 ntBASIC2.54□□□□□ -2
TOP3BO95985 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
TOP3BO95985 CBX3P9-201ENST00000402326 552 ntBASIC2.54□□□□□ -2
TOP3BO95985 Y_RNA.597-201ENST00000410463 100 ntBASIC2.54□□□□□ -2
TOP3BO95985 RNU6-1328P-201ENST00000410938 106 ntBASIC2.54□□□□□ -2
TOP3BO95985 EIF4EP4-201ENST00000424916 578 ntBASIC2.54□□□□□ -2
TOP3BO95985 HMGN2P23-201ENST00000456759 269 ntBASIC2.54□□□□□ -2
TOP3BO95985 Y_RNA.641-201ENST00000459414 105 ntBASIC2.54□□□□□ -2
TOP3BO95985 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.54□□□□□ -2
TOP3BO95985 Y_RNA.662-201ENST00000516028 97 ntBASIC2.54□□□□□ -2
TOP3BO95985 RNU6-1278P-201ENST00000516130 107 ntBASIC2.54□□□□□ -2
TOP3BO95985 RNY3P16-201ENST00000516338 101 ntBASIC2.54□□□□□ -2
TOP3BO95985 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.54□□□□□ -2
TOP3BO95985 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.54□□□□□ -2
TOP3BO95985 MIR3923-201ENST00000579521 83 ntBASIC2.54□□□□□ -2
TOP3BO95985 MIR3145-201ENST00000580727 82 ntBASIC2.54□□□□□ -2
TOP3BO95985 AC005828.6-201ENST00000606610 232 ntBASIC2.54□□□□□ -2
TOP3BO95985 AC021753.1-201ENST00000635724 168 ntBASIC2.54□□□□□ -2
TOP3BO95985 U6.106-201ENST00000636360 105 ntBASIC2.54□□□□□ -2
TOP3BO95985 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.54□□□□□ -2
TOP3BO95985 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
TOP3BO95985 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.54□□□□□ -2
TOP3BO95985 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
TOP3BO95985 AC010329.5-201ENST00000623497 2174 ntBASIC2.53□□□□□ -2
TOP3BO95985 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TOP3BO95985 RNU1-62P-201ENST00000362599 164 ntBASIC2.53□□□□□ -2
TOP3BO95985 Y_RNA.240-201ENST00000364469 95 ntBASIC2.53□□□□□ -2
TOP3BO95985 RNU6-1199P-201ENST00000411249 104 ntBASIC2.53□□□□□ -2
TOP3BO95985 MICF-203ENST00000432679 129 ntBASIC2.53□□□□□ -2
TOP3BO95985 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.53□□□□□ -2
TOP3BO95985 RPL23AP70-201ENST00000483361 460 ntBASIC2.53□□□□□ -2
TOP3BO95985 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.53□□□□□ -2
TOP3BO95985 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.53□□□□□ -2
TOP3BO95985 RNU6-191P-201ENST00000516295 94 ntBASIC2.53□□□□□ -2
TOP3BO95985 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.53□□□□□ -2
TOP3BO95985 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TOP3BO95985 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.53□□□□□ -2
TOP3BO95985 AP002001.1-203ENST00000534002 267 ntBASIC2.53□□□□□ -2
TOP3BO95985 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
TOP3BO95985 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.53□□□□□ -2
TOP3BO95985 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.53□□□□□ -2
TOP3BO95985 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.53□□□□□ -2
TOP3BO95985 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.53□□□□□ -2
TOP3BO95985 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TOP3BO95985 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
TOP3BO95985 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
TOP3BO95985 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TOP3BO95985 Y_RNA.170-201ENST00000363746 110 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 Y_RNA.308-201ENST00000365043 101 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 Y_RNA.466-201ENST00000384294 113 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 MIR218-1-201ENST00000384999 110 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 MTCO2P33-201ENST00000402100 465 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 MIR320B2-201ENST00000408479 138 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.52□□□□□ -2.01
TOP3BO95985 RNU6-155P-201ENST00000516347 100 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 MIR4308-201ENST00000580634 81 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 RPL30P11-203ENST00000598995 310 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 SNRPGP20-201ENST00000604477 205 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.52□□□□□ -2.01
TOP3BO95985 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.52□□□□□ -2.01
TOP3BO95985 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TOP3BO95985 snoU2_19.1-201ENST00000362361 80 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 SNORD114-1-201ENST00000362705 72 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 Y_RNA.140-201ENST00000363474 103 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 Y_RNA.435-201ENST00000384095 112 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 RNU6-1310P-201ENST00000384153 107 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 RNU2-54P-201ENST00000410299 190 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 RNA5SP201-201ENST00000410316 124 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 AC024067.1-201ENST00000426199 223 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 AC140059.1-201ENST00000489238 361 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.51□□□□□ -2.01
TOP3BO95985 SCARNA3-201ENST00000517097 143 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 AP005660.1-201ENST00000522972 293 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 MIR4446-201ENST00000578505 67 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 MIR3199-1-201ENST00000582434 88 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 MIR3616-201ENST00000584070 92 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.51□□□□□ -2.01
TOP3BO95985 DEFB117-201ENST00000602356 141 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 AL670379.2-201ENST00000604983 252 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 PCGEM1.1-201ENST00000613431 131 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 snoU18.1-201ENST00000629629 71 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 MIR7157-201ENST00000635801 60 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 MIR3674-201ENST00000636576 68 ntBASIC2.51□□□□□ -2.01
TOP3BO95985 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms