Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 HMGN2P38-201ENST00000423806 265 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.81□□□□□ -2.12
CLDN1O95832 MTCO1P44-201ENST00000441935 243 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 AL118496.2-201ENST00000448300 230 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 PCNPP5-201ENST00000452246 481 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.81□□□□□ -2.12
CLDN1O95832 AC010655.3-201ENST00000478818 450 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 AC079804.2-201ENST00000490376 200 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 RNU2-34P-201ENST00000516534 121 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 RNA5SP137-201ENST00000516833 135 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 Y_RNA.720-201ENST00000517166 92 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 MIR4659A-201ENST00000580269 81 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 MIR4423-201ENST00000580922 80 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 RAC1P9-201ENST00000604990 392 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.81□□□□□ -2.12
CLDN1O95832 AL078596.1-201ENST00000624856 447 ntBASIC1.81□□□□□ -2.12
CLDN1O95832 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CLDN1O95832 RNU6-545P-201ENST00000362681 104 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 RNU6-727P-201ENST00000363592 107 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 Y_RNA.162-201ENST00000363683 102 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 RNU6-975P-201ENST00000384296 105 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 RNU6-1026P-201ENST00000384465 108 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 AL033519.2-201ENST00000403958 392 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 MIR1262-201ENST00000408276 93 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 AL139156.1-201ENST00000412785 841 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 EDDM3CP-201ENST00000415977 425 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 MTND2P23-201ENST00000422990 651 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 TOMM22P2-201ENST00000430735 237 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 UQCRBP2-201ENST00000447827 297 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 MTND5P22-201ENST00000458380 195 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 AC010531.2-201ENST00000465012 153 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 Y_RNA.713-201ENST00000517013 96 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 AP002001.1-203ENST00000534002 267 ntBASIC1.8□□□□□ -2.12
CLDN1O95832 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.8□□□□□ -2.12
CLDN1O95832 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLDN1O95832 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.79□□□□□ -2.12
CLDN1O95832 RNU6-961P-201ENST00000363893 105 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 Y_RNA.224-201ENST00000364308 111 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 SNORD87-201ENST00000364849 89 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 Y_RNA.471-201ENST00000384312 102 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 RNU6-1235P-201ENST00000384559 107 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 MIR548B-201ENST00000385247 97 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 SNORA48.3-201ENST00000391081 134 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 RNU4-62P-201ENST00000410125 130 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 AL356379.1-201ENST00000414105 126 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 AL445685.2-201ENST00000422551 342 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 RAB28P5-201ENST00000427490 651 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 AL357134.1-201ENST00000445848 426 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 RNU6-498P-201ENST00000459468 107 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 AC114982.1-201ENST00000469402 321 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.79□□□□□ -2.12
CLDN1O95832 AC025465.3-201ENST00000510570 311 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 SNORA4.4-201ENST00000515921 135 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 RNU6-327P-201ENST00000516270 127 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 RNU1-117P-201ENST00000517041 158 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.79□□□□□ -2.12
CLDN1O95832 AC136443.5-201ENST00000603741 370 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.79□□□□□ -2.12
CLDN1O95832 AC131280.1-202ENST00000624067 4211 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU6-743P-201ENST00000364151 106 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 Y_RNA.230-201ENST00000364348 109 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU6-1305P-201ENST00000364353 104 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 Y_RNA.462-201ENST00000384268 102 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 SNORD14D-201ENST00000384390 87 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RPL21P1-201ENST00000399532 476 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 MIR1185-2-201ENST00000408687 86 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN1O95832 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
CLDN1O95832 RNU1-131P-201ENST00000458943 161 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU6-717P-201ENST00000459076 104 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU6-625P-201ENST00000459412 107 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU6-221P-201ENST00000459541 99 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU6-1045P-201ENST00000516321 107 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 MIR514B-201ENST00000516774 80 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU1-40P-201ENST00000516816 164 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU1-97P-201ENST00000516872 164 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 RNU6-856P-201ENST00000516959 98 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 AC131281.1-201ENST00000522984 164 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN1O95832 AL117187.1-201ENST00000555482 181 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN1O95832 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.78□□□□□ -2.12
CLDN1O95832 MIR4753-201ENST00000585119 83 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 AL109918.3-201ENST00000603072 338 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 Y_RNA.772-201ENST00000606692 102 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 AC011476.5-201ENST00000615594 130 ntBASIC1.78□□□□□ -2.12
CLDN1O95832 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CLDN1O95832 AL359851.1-201ENST00000569460 4997 ntBASIC1.78□□□□□ -2.13
CLDN1O95832 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CLDN1O95832 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CLDN1O95832 Y_RNA.183-201ENST00000363882 113 ntBASIC1.77□□□□□ -2.13
CLDN1O95832 SNORD63-201ENST00000384262 68 ntBASIC1.77□□□□□ -2.13
CLDN1O95832 Y_RNA.570-201ENST00000384750 101 ntBASIC1.77□□□□□ -2.13
CLDN1O95832 MIR17-201ENST00000385012 84 ntBASIC1.77□□□□□ -2.13
CLDN1O95832 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CLDN1O95832 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.77□□□□□ -2.13
CLDN1O95832 AL358176.2-201ENST00000425769 204 ntBASIC1.77□□□□□ -2.13
CLDN1O95832 AC005002.2-201ENST00000438228 269 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms