Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.25□□□□□ -2.45
ABCA1O95477 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 AC022878.1-201ENST00000530684 149 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.25□□□□□ -2.45
ABCA1O95477 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
ABCA1O95477 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.25□□□□□ -2.45
ABCA1O95477 ZNF204P-201ENST00000416749 2397 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 SNORA1B-201ENST00000362535 133 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 SNORA2.2-201ENST00000365473 135 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 RNA5SP118-201ENST00000410385 109 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 RPS27AP14-201ENST00000422868 454 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 MTCO2P23-201ENST00000425216 680 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 RNU6-448P-201ENST00000517052 107 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 SNORA74.3-201ENST00000517108 154 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 AC104383.1-201ENST00000530297 370 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 AL512506.1-201ENST00000613918 449 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 AC104260.1-201ENST00000616660 539 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 AC022418.1-201ENST00000624118 445 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 SNORD68-201ENST00000363214 84 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 SNORD14C-201ENST00000365382 88 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 ELOCP21-201ENST00000412558 336 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.26□□□□□ -2.45
ABCA1O95477 BTBD7P2-201ENST00000441962 620 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 HSFY5P-201ENST00000453726 309 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 AC005178.1-201ENST00000508392 440 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 AC105417.1-201ENST00000514691 285 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.26□□□□□ -2.45
ABCA1O95477 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.26□□□□□ -2.45
ABCA1O95477 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.26□□□□□ -2.45
ABCA1O95477 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.26□□□□□ -2.45
ABCA1O95477 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 MIR378F-201ENST00000578143 78 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 RNA5SP517-201ENST00000364724 117 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 RNU6-224P-201ENST00000384055 107 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 RNU6-125P-201ENST00000384505 107 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 RNU6-541P-201ENST00000384709 110 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 MTCO2P8-201ENST00000412213 658 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.26□□□□□ -2.45
ABCA1O95477 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.26□□□□□ -2.45
ABCA1O95477 MTND4P18-201ENST00000447010 465 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 AC114811.1-201ENST00000507207 168 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 AC025449.1-201ENST00000603896 529 ntBASIC-0.26□□□□□ -2.45
ABCA1O95477 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.26□□□□□ -2.45
ABCA1O95477 MIR377-201ENST00000362145 69 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RNU6-393P-201ENST00000384475 107 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RNU6-735P-201ENST00000410612 107 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 AC008134.1-201ENST00000420943 193 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RPL22P17-201ENST00000438729 315 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.27□□□□□ -2.45
ABCA1O95477 AC091951.3-201ENST00000504093 246 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RNU7-41P-201ENST00000515917 61 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RNU7-28P-201ENST00000516759 62 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.27□□□□□ -2.45
ABCA1O95477 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.27□□□□□ -2.45
ABCA1O95477 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.27□□□□□ -2.45
ABCA1O95477 AC008507.2-201ENST00000588402 1176 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 AC007684.1-201ENST00000609671 477 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 AC138649.3-201ENST00000622154 254 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 AC010608.3-201ENST00000625048 527 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 MIR145-201ENST00000384967 88 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
ABCA1O95477 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.27□□□□□ -2.45
ABCA1O95477 MTATP6P16-201ENST00000434543 526 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 EPS15P1-201ENST00000448836 336 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RPL17P19-201ENST00000489069 552 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RNU7-128P-201ENST00000517247 62 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.27□□□□□ -2.45
ABCA1O95477 MIR4778-201ENST00000577635 80 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 AL096861.1-201ENST00000610899 123 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 MIR8064-201ENST00000612863 90 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 MIR548AZ-201ENST00000616567 95 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 SNORA43.4-201ENST00000629559 138 ntBASIC-0.27□□□□□ -2.45
ABCA1O95477 RNU6-137P-201ENST00000363680 108 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 SNORD114-11-201ENST00000363738 75 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 MTATP6P20-201ENST00000414147 562 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 MTCO2P29-201ENST00000465212 189 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 AC090572.1-201ENST00000519251 160 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 RMST_3.1-201ENST00000611651 109 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 U6.73-201ENST00000619194 103 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 AC091948.2-201ENST00000636510 279 ntBASIC-0.28□□□□□ -2.45
ABCA1O95477 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RNA5SP275-201ENST00000363936 118 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 RNU6-434P-201ENST00000384376 107 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.29□□□□□ -2.46
ABCA1O95477 Z98949.2-201ENST00000440996 144 ntBASIC-0.29□□□□□ -2.46
ABCA1O95477 MTCO3P8-201ENST00000453691 755 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms