Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR5092-201ENST00000583139 88 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 AC108706.1-201ENST00000611053 297 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 AC090517.3-201ENST00000625170 141 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 MIR7157-201ENST00000635801 60 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.9
VAMP4O75379 AC009487.2-201ENST00000420969 6821 ntBASIC3.21□□□□□ -1.9
VAMP4O75379 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.21□□□□□ -1.9
VAMP4O75379 Y_RNA.7-201ENST00000362352 102 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 Y_RNA.441-201ENST00000384123 112 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 Y_RNA.456-201ENST00000384232 111 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 MIR1283-1-201ENST00000408494 87 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 AL135790.2-201ENST00000437701 267 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 SNORA59A-201ENST00000459326 152 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 AC091021.1-201ENST00000468051 388 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.2□□□□□ -1.9
VAMP4O75379 AL713866.2-201ENST00000603579 219 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 AC013791.1-201ENST00000616619 62 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 U4.3-201ENST00000621047 82 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 AC021753.1-201ENST00000635724 168 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 Z82209.1-201ENST00000422141 2135 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.2□□□□□ -1.9
VAMP4O75379 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VAMP4O75379 Y_RNA.121-201ENST00000363309 113 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 Y_RNA.170-201ENST00000363746 110 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 Y_RNA.287-201ENST00000364853 94 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 Y_RNA.310-201ENST00000365063 113 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 RNU6-234P-201ENST00000365229 104 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 RNU6-1274P-201ENST00000384557 107 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 Y_RNA.571-201ENST00000384753 98 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VAMP4O75379 SNORA26.5-201ENST00000391215 123 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 RNU6-1328P-201ENST00000410938 106 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 RNU7-14P-201ENST00000459331 62 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 SCARNA3-201ENST00000517097 143 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 RNU6-586P-201ENST00000517265 104 ntBASIC3.19□□□□□ -1.9
VAMP4O75379 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VAMP4O75379 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.19□□□□□ -1.9
VAMP4O75379 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.18□□□□□ -1.9
VAMP4O75379 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
VAMP4O75379 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
VAMP4O75379 RNU6-944P-201ENST00000364023 107 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 Y_RNA.238-201ENST00000364441 102 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 SNORA68.1-201ENST00000364537 132 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 RNU6-312P-201ENST00000364629 107 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 RNU6-187P-201ENST00000384139 106 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 SNORA72.4-201ENST00000384174 132 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 RNU6-1135P-201ENST00000411083 103 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 AC074290.1-201ENST00000448883 135 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 AC114982.1-201ENST00000469402 321 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 UBE2DNL-203ENST00000474922 222 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 AC100767.1-201ENST00000528178 123 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 MIR3144-201ENST00000579460 79 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 MIR3910-1-201ENST00000580936 111 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.18□□□□□ -1.9
VAMP4O75379 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
VAMP4O75379 AC009487.4-201ENST00000624969 3585 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 AL159152.1-201ENST00000635019 2587 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 AL157777.2-201ENST00000258070 137 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 Y_RNA.341-201ENST00000365341 102 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 RNU4-17P-201ENST00000365598 141 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 AL355497.1-201ENST00000406262 551 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 RPL30P4-201ENST00000429309 333 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
VAMP4O75379 RNU7-57P-201ENST00000459540 60 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.17□□□□□ -1.9
VAMP4O75379 MIR4753-201ENST00000585119 83 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 MIR7515-201ENST00000637837 67 ntBASIC3.17□□□□□ -1.9
VAMP4O75379 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP4O75379 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP4O75379 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VAMP4O75379 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.17□□□□□ -1.9
VAMP4O75379 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAMP4O75379 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
VAMP4O75379 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VAMP4O75379 Y_RNA.75-201ENST00000362927 97 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 RNU6-899P-201ENST00000363947 107 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 SNORD31B-201ENST00000364977 69 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 RNU6-975P-201ENST00000384296 105 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 AL359511.1-201ENST00000402970 211 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 AL139095.1-201ENST00000404326 391 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.16□□□□□ -1.9
VAMP4O75379 MIR449C-201ENST00000516047 92 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 RNU7-200P-201ENST00000516105 62 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
VAMP4O75379 MIR5688-201ENST00000580619 83 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
VAMP4O75379 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.16□□□□□ -1.9
VAMP4O75379 U2.22-201ENST00000636441 106 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.16□□□□□ -1.9
VAMP4O75379 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VAMP4O75379 AC016717.2-201ENST00000609089 5141 ntBASIC3.16□□□□□ -1.9
VAMP4O75379 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
VAMP4O75379 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
VAMP4O75379 RNU6-855P-201ENST00000410395 104 ntBASIC3.15□□□□□ -1.91
VAMP4O75379 HSPE1P13-201ENST00000451143 297 ntBASIC3.15□□□□□ -1.91
VAMP4O75379 RNU6-221P-201ENST00000459541 99 ntBASIC3.15□□□□□ -1.91
VAMP4O75379 AC080013.2-201ENST00000460866 323 ntBASIC3.15□□□□□ -1.91
VAMP4O75379 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.15□□□□□ -1.91
VAMP4O75379 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms