Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 Y_RNA.495-201ENST00000384435 112 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 AL606845.1-201ENST00000404881 255 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 AC105272.1-201ENST00000438604 198 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 AC083906.5-201ENST00000503722 328 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.87□□□□□ -1.79
PTCD1O75127 Y_RNA.694-201ENST00000516677 117 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 NDUFA5P6-201ENST00000542110 379 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 MIR3646-201ENST00000578301 84 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.87□□□□□ -1.79
PTCD1O75127 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PTCD1O75127 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCD1O75127 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTCD1O75127 AC008555.8-201ENST00000623602 2168 ntBASIC3.87□□□□□ -1.79
PTCD1O75127 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.87□□□□□ -1.79
PTCD1O75127 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTCD1O75127 AL136360.1-201ENST00000503377 1900 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 Y_RNA.280-201ENST00000364765 112 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 RNU6-234P-201ENST00000365229 104 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 Y_RNA.369-201ENST00000365568 117 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 CD24P4-201ENST00000382840 243 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.86□□□□□ -1.79
PTCD1O75127 HMGN1P18-201ENST00000457642 277 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 RNU6-586P-201ENST00000517265 104 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 AL391903.3-201ENST00000612158 163 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 AL591926.4-201ENST00000616895 298 ntBASIC3.86□□□□□ -1.79
PTCD1O75127 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PTCD1O75127 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD1O75127 RNA5SP139-201ENST00000364340 117 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 SNORD73B-201ENST00000364394 72 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 Y_RNA.393-201ENST00000383936 102 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 MIR218-1-201ENST00000384999 110 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTCD1O75127 AL355796.1-201ENST00000406706 323 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCD1O75127 AC010401.1-201ENST00000463867 348 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 ATP5EP1-201ENST00000510257 156 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 AC109329.2-201ENST00000519658 482 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 AC027419.1-201ENST00000522976 328 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCD1O75127 AC007318.2-201ENST00000620999 243 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PTCD1O75127 PWAR6-201ENST00000552334 4618 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 GABRG2-229ENST00000641017 3628 ntBASIC3.85□□□□□ -1.79
PTCD1O75127 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD1O75127 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCD1O75127 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.85□□□□□ -1.79
PTCD1O75127 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PTCD1O75127 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 MIR184-201ENST00000384962 84 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 RNY4P30-201ENST00000410216 95 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 RNU6-57P-201ENST00000411348 103 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 AL121890.1-201ENST00000435457 205 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 AC016717.1-201ENST00000448918 286 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 RNU1-143P-201ENST00000516296 146 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 SCARNA11.3-201ENST00000517276 130 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 U1.23-201ENST00000610293 146 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 RNU1-68P-201ENST00000615382 146 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 U1.39-201ENST00000621562 146 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 AC068647.2-201ENST00000637380 353 ntBASIC3.84□□□□□ -1.79
PTCD1O75127 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.84□□□□□ -1.79
PTCD1O75127 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD1O75127 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PTCD1O75127 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCD1O75127 AC009487.2-201ENST00000420969 6821 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD1O75127 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD1O75127 MIR367-201ENST00000362299 68 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 Y_RNA.388-201ENST00000383919 113 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 SNORA20B-201ENST00000384220 132 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 Y_RNA.521-201ENST00000384560 114 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 MIR591-201ENST00000385290 95 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 MIR526A2-201ENST00000390198 65 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 MIR873-201ENST00000401120 77 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 MIR1302-4-201ENST00000408701 150 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 RPL30P4-201ENST00000429309 333 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 RPL23AP7-203ENST00000449021 469 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 AC117454.1-201ENST00000491120 168 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 AL031274.2-201ENST00000599419 203 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 AC120024.3-201ENST00000603167 156 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCD1O75127 Z82209.1-201ENST00000422141 2135 ntBASIC3.83□□□□□ -1.8
PTCD1O75127 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD1O75127 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PTCD1O75127 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCD1O75127 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD1O75127 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCD1O75127 RNU1-72P-201ENST00000362976 153 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 MIR518C-201ENST00000384822 101 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 RNU6-383P-201ENST00000410864 94 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 RN7SKP284-201ENST00000411002 343 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 RPS27P1-201ENST00000450552 247 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 Y_RNA.651-201ENST00000459380 103 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 RN7SL20P-201ENST00000488827 297 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 RNU6-1337P-201ENST00000516525 95 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 RNU6-965P-201ENST00000516721 96 ntBASIC3.82□□□□□ -1.8
PTCD1O75127 MIR4724-201ENST00000579485 89 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms