Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 RNU1-52P-201ENST00000384190 164 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 Y_RNA.541-201ENST00000384640 113 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 MIR515-2-201ENST00000384883 83 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 MIR515-1-201ENST00000384884 83 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 MT-TW-201ENST00000387382 68 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 AL031003.1-201ENST00000404229 172 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 AC011406.1-201ENST00000512440 370 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 RNU6-237P-201ENST00000515985 71 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.59□□□□□ -1.99
PCDHGA12O60330 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.59□□□□□ -1.99
PCDHGA12O60330 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.59□□□□□ -1.99
PCDHGA12O60330 CENPCP1-201ENST00000533085 2578 ntBASIC2.59□□□□□ -1.99
PCDHGA12O60330 ZNF658B-202ENST00000615961 3375 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 SNORA25.1-201ENST00000362326 128 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 RNA5SP493-201ENST00000364115 91 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 RNU6-1164P-201ENST00000364428 107 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 Y_RNA.286-201ENST00000364813 102 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 RNU6-102P-201ENST00000384485 104 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
PCDHGA12O60330 SNORA3.2-201ENST00000408221 125 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 MIR548H3-201ENST00000408771 118 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA12O60330 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.58□□□□□ -2
PCDHGA12O60330 ATP5J2P3-201ENST00000451550 258 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 SNORD127-201ENST00000458892 86 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 SERF1AP1-201ENST00000514575 187 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA12O60330 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.58□□□□□ -2
PCDHGA12O60330 AC023157.2-201ENST00000540596 141 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 AC078899.2-201ENST00000595282 212 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.15-201ENST00000611544 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.16-201ENST00000613119 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.12-201ENST00000613778 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.20-201ENST00000613956 192 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.9-201ENST00000615427 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.11-201ENST00000616345 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.2-201ENST00000616535 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.3-201ENST00000617785 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.19-201ENST00000618602 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 RNU2-1-201ENST00000618664 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.6-201ENST00000619225 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.5-201ENST00000619465 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 U2.10-201ENST00000620268 191 ntBASIC2.58□□□□□ -2
PCDHGA12O60330 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
PCDHGA12O60330 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
PCDHGA12O60330 MTND5P6-201ENST00000422338 1798 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 SNORA27.1-201ENST00000362604 124 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 U8.2-201ENST00000363156 134 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 Y_RNA.329-201ENST00000365209 107 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 Y_RNA.478-201ENST00000384358 107 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 Y_RNA.483-201ENST00000384380 101 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 RNA5SP465-201ENST00000391195 109 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 AC060773.1-201ENST00000421698 310 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 RNU6-1132P-201ENST00000459214 107 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 snoU13.26-201ENST00000459452 105 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 RPL39P38-201ENST00000467018 153 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 DEFB108E-201ENST00000524692 240 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 AC005786.1-201ENST00000588553 154 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 AL512605.2-201ENST00000592972 256 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 AP001282.2-201ENST00000616149 309 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
PCDHGA12O60330 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA12O60330 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHGA12O60330 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA12O60330 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA12O60330 SNORD114-6-201ENST00000364393 72 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 MIR504-201ENST00000385065 83 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 MIR27B-201ENST00000385129 97 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 MT-TG-201ENST00000387429 68 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 SNORA11.4-201ENST00000408823 129 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 HSPE1P13-201ENST00000451143 297 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.56□□□□□ -2
PCDHGA12O60330 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 FO624990.1-201ENST00000636373 85 ntBASIC2.56□□□□□ -2
PCDHGA12O60330 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHGA12O60330 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
PCDHGA12O60330 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PCDHGA12O60330 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
PCDHGA12O60330 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA12O60330 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PCDHGA12O60330 snoU2-30.2-201ENST00000362805 70 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 SNORD115-3-201ENST00000363100 82 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 Y_RNA.237-201ENST00000364439 102 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 Y_RNA.352-201ENST00000365439 102 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 RNU6-574P-201ENST00000384265 107 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 AL355796.1-201ENST00000406706 323 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 AC016909.1-201ENST00000415916 166 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 RPL23AP7-203ENST00000449021 469 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
PCDHGA12O60330 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PCDHGA12O60330 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
PCDHGA12O60330 Y_RNA.14-201ENST00000362415 103 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms