Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 RNA5SP21-201ENST00000410917 96 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 BTF3P11-201ENST00000426582 477 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCA5O60264 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCA5O60264 LARP7P3-201ENST00000579888 337 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SMARCA5O60264 MIR4635-201ENST00000583759 79 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.3□□□□□ -1.88
SMARCA5O60264 AC005562.2-201ENST00000618264 111 ntBASIC3.3□□□□□ -1.88
SMARCA5O60264 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.3□□□□□ -1.88
SMARCA5O60264 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SMARCA5O60264 AC009487.2-201ENST00000420969 6821 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU6-245P-201ENST00000384020 107 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU6-793P-201ENST00000384233 104 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 MIR524-201ENST00000385242 87 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU2-2P-201ENST00000410396 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 AL137159.1-201ENST00000452808 512 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 Y_RNA.637-201ENST00000459424 114 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU5F-4P-201ENST00000516581 114 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU6-965P-201ENST00000516721 96 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU2-4P-201ENST00000606190 192 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.15-201ENST00000611544 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.16-201ENST00000613119 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.12-201ENST00000613778 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 TCL6_2.1-201ENST00000615162 119 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.9-201ENST00000615427 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.11-201ENST00000616345 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.2-201ENST00000616535 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.3-201ENST00000617785 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.19-201ENST00000618602 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU2-1-201ENST00000618664 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.6-201ENST00000619225 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.5-201ENST00000619465 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 U2.10-201ENST00000620268 191 ntBASIC3.29□□□□□ -1.88
SMARCA5O60264 RNU6-454P-201ENST00000364292 107 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 Y_RNA.412-201ENST00000384001 104 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 RNU6-1081P-201ENST00000384537 107 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 MIR592-201ENST00000384959 97 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 Y_RNA.580-201ENST00000391004 95 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 RNA5SP210-201ENST00000391034 120 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 SNORD88.1-201ENST00000408684 91 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 RNU2-54P-201ENST00000410299 190 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 AC009963.1-201ENST00000417265 157 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.28□□□□□ -1.88
SMARCA5O60264 AL135790.2-201ENST00000437701 267 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 SNORA4.4-201ENST00000515921 135 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 RPL12P50-201ENST00000603116 116 ntBASIC3.28□□□□□ -1.88
SMARCA5O60264 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMARCA5O60264 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.28□□□□□ -1.88
SMARCA5O60264 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SMARCA5O60264 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCA5O60264 Y_RNA.329-201ENST00000365209 107 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 RN7SKP284-201ENST00000411002 343 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 AC004866.1-201ENST00000411748 78 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 SNORD109B-201ENST00000458961 67 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 U8.19-201ENST00000459095 133 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 SNORD109A-201ENST00000459128 67 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 AP001486.1-201ENST00000463339 476 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCA5O60264 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCA5O60264 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCA5O60264 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCA5O60264 MIR1248-201ENST00000629190 106 ntBASIC3.27□□□□□ -1.89
SMARCA5O60264 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SMARCA5O60264 Y_RNA.238-201ENST00000364441 102 ntBASIC3.26□□□□□ -1.89
SMARCA5O60264 Y_RNA.415-201ENST00000384012 112 ntBASIC3.26□□□□□ -1.89
SMARCA5O60264 MIR29C-201ENST00000385231 88 ntBASIC3.26□□□□□ -1.89
SMARCA5O60264 SEPT7P4-201ENST00000437076 306 ntBASIC3.26□□□□□ -1.89
SMARCA5O60264 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCA5O60264 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.26□□□□□ -1.89
SMARCA5O60264 RNA5SP272-201ENST00000516095 111 ntBASIC3.26□□□□□ -1.89
SMARCA5O60264 RNU2-12P-201ENST00000517216 168 ntBASIC3.26□□□□□ -1.89
SMARCA5O60264 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCA5O60264 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.26□□□□□ -1.89
SMARCA5O60264 MIR3674-201ENST00000636576 68 ntBASIC3.26□□□□□ -1.89
SMARCA5O60264 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCA5O60264 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCA5O60264 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCA5O60264 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SMARCA5O60264 Y_RNA.7-201ENST00000362352 102 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 RNU6-1290P-201ENST00000362957 109 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 RNU6-22P-201ENST00000384355 107 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 Y_RNA.497-201ENST00000384447 98 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 RNU6-1117P-201ENST00000384525 104 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 Y_RNA.568-201ENST00000384742 113 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 RNU6-763P-201ENST00000390865 106 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 RNU2-51P-201ENST00000410708 197 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCA5O60264 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.25□□□□□ -1.89
SMARCA5O60264 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.25□□□□□ -1.89
SMARCA5O60264 RNU6-436P-201ENST00000516171 114 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 RNA5SP490-201ENST00000517141 136 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 CYCSP23-201ENST00000519781 313 ntBASIC3.25□□□□□ -1.89
SMARCA5O60264 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.25□□□□□ -1.89
SMARCA5O60264 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCA5O60264 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCA5O60264 Y_RNA.99-201ENST00000363138 105 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms