Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.18□□□□□ -2.06
LDB2O43679 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LDB2O43679 AC009487.4-201ENST00000624969 3585 ntBASIC2.18□□□□□ -2.06
LDB2O43679 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.18□□□□□ -2.06
LDB2O43679 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LDB2O43679 MIR335-201ENST00000362173 94 ntBASIC2.17□□□□□ -2.06
LDB2O43679 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
LDB2O43679 RNU6-743P-201ENST00000364151 106 ntBASIC2.17□□□□□ -2.06
LDB2O43679 Y_RNA.286-201ENST00000364813 102 ntBASIC2.17□□□□□ -2.06
LDB2O43679 Y_RNA.446-201ENST00000384178 104 ntBASIC2.17□□□□□ -2.06
LDB2O43679 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
LDB2O43679 RNU2-38P-201ENST00000410856 79 ntBASIC2.17□□□□□ -2.06
LDB2O43679 AC011753.1-201ENST00000451001 220 ntBASIC2.17□□□□□ -2.06
LDB2O43679 AL137159.1-201ENST00000452808 512 ntBASIC2.17□□□□□ -2.06
LDB2O43679 HMGB3P17-201ENST00000504195 649 ntBASIC2.17□□□□□ -2.06
LDB2O43679 RNU6-1338P-201ENST00000516328 91 ntBASIC2.17□□□□□ -2.06
LDB2O43679 SCARNA16.3-201ENST00000516595 184 ntBASIC2.17□□□□□ -2.06
LDB2O43679 RNU6-667P-201ENST00000517186 102 ntBASIC2.17□□□□□ -2.06
LDB2O43679 PRELID2P1-201ENST00000552837 301 ntBASIC2.17□□□□□ -2.06
LDB2O43679 AC110588.1-201ENST00000559699 137 ntBASIC2.17□□□□□ -2.06
LDB2O43679 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.17□□□□□ -2.06
LDB2O43679 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.16□□□□□ -2.06
LDB2O43679 AL391987.6-201ENST00000305671 199 ntBASIC2.16□□□□□ -2.06
LDB2O43679 Y_RNA.14-201ENST00000362415 103 ntBASIC2.16□□□□□ -2.06
LDB2O43679 Y_RNA.188-201ENST00000363952 111 ntBASIC2.16□□□□□ -2.06
LDB2O43679 RNU6-454P-201ENST00000364292 107 ntBASIC2.16□□□□□ -2.06
LDB2O43679 Y_RNA.237-201ENST00000364439 102 ntBASIC2.16□□□□□ -2.06
LDB2O43679 Y_RNA.307-201ENST00000365022 117 ntBASIC2.16□□□□□ -2.06
LDB2O43679 RNU6-975P-201ENST00000384296 105 ntBASIC2.16□□□□□ -2.06
LDB2O43679 Y_RNA.562-201ENST00000384695 113 ntBASIC2.16□□□□□ -2.06
LDB2O43679 MIR1185-2-201ENST00000408687 86 ntBASIC2.16□□□□□ -2.06
LDB2O43679 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.16□□□□□ -2.06
LDB2O43679 AC139712.2-201ENST00000424302 339 ntBASIC2.16□□□□□ -2.06
LDB2O43679 AC009238.1-201ENST00000442165 424 ntBASIC2.16□□□□□ -2.06
LDB2O43679 AC009237.6-201ENST00000446969 424 ntBASIC2.16□□□□□ -2.06
LDB2O43679 RNU7-57P-201ENST00000459540 60 ntBASIC2.16□□□□□ -2.06
LDB2O43679 RPL39P38-201ENST00000467018 153 ntBASIC2.16□□□□□ -2.06
LDB2O43679 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.16□□□□□ -2.06
LDB2O43679 AC093259.1-201ENST00000509755 300 ntBASIC2.16□□□□□ -2.06
LDB2O43679 RNU6-155P-201ENST00000516347 100 ntBASIC2.16□□□□□ -2.06
LDB2O43679 RNU2-12P-201ENST00000517216 168 ntBASIC2.16□□□□□ -2.06
LDB2O43679 DEFB108E-201ENST00000524692 240 ntBASIC2.16□□□□□ -2.06
LDB2O43679 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.16□□□□□ -2.06
LDB2O43679 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.16□□□□□ -2.06
LDB2O43679 MIR1273D-201ENST00000577266 86 ntBASIC2.16□□□□□ -2.06
LDB2O43679 AC008749.1-201ENST00000597650 306 ntBASIC2.16□□□□□ -2.06
LDB2O43679 AC006380.1-201ENST00000603598 186 ntBASIC2.16□□□□□ -2.06
LDB2O43679 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.16□□□□□ -2.06
LDB2O43679 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LDB2O43679 Y_RNA.16-201ENST00000362421 102 ntBASIC2.15□□□□□ -2.07
LDB2O43679 Y_RNA.332-201ENST00000365271 113 ntBASIC2.15□□□□□ -2.07
LDB2O43679 Y_RNA.350-201ENST00000365409 98 ntBASIC2.15□□□□□ -2.07
LDB2O43679 MIR144-201ENST00000384886 86 ntBASIC2.15□□□□□ -2.07
LDB2O43679 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LDB2O43679 SNORA53-201ENST00000391141 249 ntBASIC2.15□□□□□ -2.07
LDB2O43679 RNU6-1199P-201ENST00000411249 104 ntBASIC2.15□□□□□ -2.07
LDB2O43679 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.15□□□□□ -2.07
LDB2O43679 RPL23AP3-201ENST00000453844 468 ntBASIC2.15□□□□□ -2.07
LDB2O43679 RNU6-991P-201ENST00000516168 107 ntBASIC2.15□□□□□ -2.07
LDB2O43679 RNU6-966P-201ENST00000516479 104 ntBASIC2.15□□□□□ -2.07
LDB2O43679 RNU2-34P-201ENST00000516534 121 ntBASIC2.15□□□□□ -2.07
LDB2O43679 NDUFA5P6-201ENST00000542110 379 ntBASIC2.15□□□□□ -2.07
LDB2O43679 MIR3671-201ENST00000580455 88 ntBASIC2.15□□□□□ -2.07
LDB2O43679 AC037487.3-201ENST00000606668 112 ntBASIC2.15□□□□□ -2.07
LDB2O43679 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
LDB2O43679 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
LDB2O43679 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.15□□□□□ -2.07
LDB2O43679 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
LDB2O43679 snoZ196.1-201ENST00000625269 89 ntBASIC2.15□□□□□ -2.07
LDB2O43679 RNU6-326P-201ENST00000365480 107 ntBASIC2.14□□□□□ -2.07
LDB2O43679 Y_RNA.383-201ENST00000383855 97 ntBASIC2.14□□□□□ -2.07
LDB2O43679 Y_RNA.447-201ENST00000384184 113 ntBASIC2.14□□□□□ -2.07
LDB2O43679 SNORA80E-201ENST00000384744 137 ntBASIC2.14□□□□□ -2.07
LDB2O43679 Y_RNA.569-201ENST00000384749 103 ntBASIC2.14□□□□□ -2.07
LDB2O43679 AC123900.1-201ENST00000420390 96 ntBASIC2.14□□□□□ -2.07
LDB2O43679 POLR2KP2-201ENST00000438155 177 ntBASIC2.14□□□□□ -2.07
LDB2O43679 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.14□□□□□ -2.07
LDB2O43679 MTND4LP30-201ENST00000454092 297 ntBASIC2.14□□□□□ -2.07
LDB2O43679 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.14□□□□□ -2.07
LDB2O43679 SERF1AP1-201ENST00000514575 187 ntBASIC2.14□□□□□ -2.07
LDB2O43679 RNU6-948P-201ENST00000516374 107 ntBASIC2.14□□□□□ -2.07
LDB2O43679 RNU2-31P-201ENST00000516954 155 ntBASIC2.14□□□□□ -2.07
LDB2O43679 RNU6-1271P-201ENST00000517049 105 ntBASIC2.14□□□□□ -2.07
LDB2O43679 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.14□□□□□ -2.07
LDB2O43679 MIR3684-201ENST00000579779 74 ntBASIC2.14□□□□□ -2.07
LDB2O43679 AC012433.1-201ENST00000588916 398 ntBASIC2.14□□□□□ -2.07
LDB2O43679 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
LDB2O43679 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
LDB2O43679 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
LDB2O43679 RNU6-1235P-201ENST00000384559 107 ntBASIC2.13□□□□□ -2.07
LDB2O43679 MIR548H3-201ENST00000408771 118 ntBASIC2.13□□□□□ -2.07
LDB2O43679 SRIP3-201ENST00000413200 219 ntBASIC2.13□□□□□ -2.07
LDB2O43679 AL357134.1-201ENST00000445848 426 ntBASIC2.13□□□□□ -2.07
LDB2O43679 PRELID3BP1-201ENST00000457142 540 ntBASIC2.13□□□□□ -2.07
LDB2O43679 RNU6-498P-201ENST00000459468 107 ntBASIC2.13□□□□□ -2.07
LDB2O43679 RNU6-221P-201ENST00000459541 99 ntBASIC2.13□□□□□ -2.07
LDB2O43679 AC010531.2-201ENST00000465012 153 ntBASIC2.13□□□□□ -2.07
LDB2O43679 IGKV3-31-201ENST00000523109 329 ntBASIC2.13□□□□□ -2.07
LDB2O43679 AC025754.2-201ENST00000606491 432 ntBASIC2.13□□□□□ -2.07
LDB2O43679 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms