Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC010409.1-201ENST00000487382 476 ntBASIC2.57□□□□□ -2
HOXA3O43365 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.57□□□□□ -2
HOXA3O43365 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
HOXA3O43365 RNU6-991P-201ENST00000516168 107 ntBASIC2.57□□□□□ -2
HOXA3O43365 RNU6-1007P-201ENST00000516586 107 ntBASIC2.57□□□□□ -2
HOXA3O43365 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.57□□□□□ -2
HOXA3O43365 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.57□□□□□ -2
HOXA3O43365 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.57□□□□□ -2
HOXA3O43365 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.57□□□□□ -2
HOXA3O43365 MTND1P7-201ENST00000632801 297 ntBASIC2.57□□□□□ -2
HOXA3O43365 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.57□□□□□ -2
HOXA3O43365 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HOXA3O43365 AC092435.3-201ENST00000565538 3654 ntBASIC2.57□□□□□ -2
HOXA3O43365 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
HOXA3O43365 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.57□□□□□ -2
HOXA3O43365 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.56□□□□□ -2
HOXA3O43365 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
HOXA3O43365 MIR367-201ENST00000362299 68 ntBASIC2.56□□□□□ -2
HOXA3O43365 Y_RNA.229-201ENST00000364347 113 ntBASIC2.56□□□□□ -2
HOXA3O43365 DYNLT3P1-201ENST00000378574 347 ntBASIC2.56□□□□□ -2
HOXA3O43365 RNU6-136P-201ENST00000384663 107 ntBASIC2.56□□□□□ -2
HOXA3O43365 RNU6-239P-201ENST00000390990 99 ntBASIC2.56□□□□□ -2
HOXA3O43365 SNORA48.8-201ENST00000391324 134 ntBASIC2.56□□□□□ -2
HOXA3O43365 AL513477.1-202ENST00000417061 214 ntBASIC2.56□□□□□ -2
HOXA3O43365 AC003685.2-201ENST00000422795 395 ntBASIC2.56□□□□□ -2
HOXA3O43365 AL606753.1-201ENST00000427435 87 ntBASIC2.56□□□□□ -2
HOXA3O43365 AL353705.1-201ENST00000433468 480 ntBASIC2.56□□□□□ -2
HOXA3O43365 EEF1B2P7-201ENST00000451177 676 ntBASIC2.56□□□□□ -2
HOXA3O43365 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
HOXA3O43365 RNU7-116P-201ENST00000516940 62 ntBASIC2.56□□□□□ -2
HOXA3O43365 AC109810.1-201ENST00000534066 224 ntBASIC2.56□□□□□ -2
HOXA3O43365 MIR4431-201ENST00000579990 94 ntBASIC2.56□□□□□ -2
HOXA3O43365 MIR2682-201ENST00000580305 110 ntBASIC2.56□□□□□ -2
HOXA3O43365 UBL5P2-201ENST00000583788 219 ntBASIC2.56□□□□□ -2
HOXA3O43365 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
HOXA3O43365 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.56□□□□□ -2
HOXA3O43365 AC009487.2-201ENST00000420969 6821 ntBASIC2.56□□□□□ -2
HOXA3O43365 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HOXA3O43365 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXA3O43365 CENPCP1-201ENST00000533085 2578 ntBASIC2.55□□□□□ -2
HOXA3O43365 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.55□□□□□ -2
HOXA3O43365 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.55□□□□□ -2
HOXA3O43365 RNU6-117P-201ENST00000365415 107 ntBASIC2.55□□□□□ -2
HOXA3O43365 SNORD50.2-201ENST00000365465 70 ntBASIC2.55□□□□□ -2
HOXA3O43365 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.55□□□□□ -2
HOXA3O43365 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HOXA3O43365 BMS1P22-201ENST00000414726 313 ntBASIC2.55□□□□□ -2
HOXA3O43365 AL135786.1-201ENST00000415892 214 ntBASIC2.55□□□□□ -2
HOXA3O43365 AC010154.1-201ENST00000425857 269 ntBASIC2.55□□□□□ -2
HOXA3O43365 CST9LP2-201ENST00000437612 320 ntBASIC2.55□□□□□ -2
HOXA3O43365 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.55□□□□□ -2
HOXA3O43365 HMGN1P18-201ENST00000457642 277 ntBASIC2.55□□□□□ -2
HOXA3O43365 AC018868.1-201ENST00000491307 315 ntBASIC2.55□□□□□ -2
HOXA3O43365 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
HOXA3O43365 AC008885.1-201ENST00000514930 301 ntBASIC2.55□□□□□ -2
HOXA3O43365 AC015720.1-201ENST00000565251 277 ntBASIC2.55□□□□□ -2
HOXA3O43365 AC127455.1-201ENST00000565496 145 ntBASIC2.55□□□□□ -2
HOXA3O43365 MIR4298-201ENST00000584380 73 ntBASIC2.55□□□□□ -2
HOXA3O43365 AL391903.3-201ENST00000612158 163 ntBASIC2.55□□□□□ -2
HOXA3O43365 MIR6852-201ENST00000621699 66 ntBASIC2.55□□□□□ -2
HOXA3O43365 AL137790.1-201ENST00000634283 177 ntBASIC2.55□□□□□ -2
HOXA3O43365 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
HOXA3O43365 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXA3O43365 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HOXA3O43365 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
HOXA3O43365 Y_RNA.400-201ENST00000383963 111 ntBASIC2.54□□□□□ -2
HOXA3O43365 SNORA44-201ENST00000384584 132 ntBASIC2.54□□□□□ -2
HOXA3O43365 AL121914.1-201ENST00000450188 156 ntBASIC2.54□□□□□ -2
HOXA3O43365 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.54□□□□□ -2
HOXA3O43365 AC006483.1-201ENST00000487308 313 ntBASIC2.54□□□□□ -2
HOXA3O43365 RPL23AP54-201ENST00000495129 419 ntBASIC2.54□□□□□ -2
HOXA3O43365 AC091826.1-201ENST00000514065 313 ntBASIC2.54□□□□□ -2
HOXA3O43365 RNU7-121P-201ENST00000516604 62 ntBASIC2.54□□□□□ -2
HOXA3O43365 RNU6-667P-201ENST00000517186 102 ntBASIC2.54□□□□□ -2
HOXA3O43365 MIR3616-201ENST00000584070 92 ntBASIC2.54□□□□□ -2
HOXA3O43365 AP001485.1-201ENST00000604799 199 ntBASIC2.54□□□□□ -2
HOXA3O43365 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.54□□□□□ -2
HOXA3O43365 uc_338.25-201ENST00000613756 156 ntBASIC2.54□□□□□ -2
HOXA3O43365 U2.20-201ENST00000613956 192 ntBASIC2.54□□□□□ -2
HOXA3O43365 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
HOXA3O43365 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HOXA3O43365 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXA3O43365 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
HOXA3O43365 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
HOXA3O43365 RNU4-13P-201ENST00000364019 141 ntBASIC2.53□□□□□ -2
HOXA3O43365 RNA5SP125-201ENST00000364843 120 ntBASIC2.53□□□□□ -2
HOXA3O43365 SNORA7.4-201ENST00000384249 137 ntBASIC2.53□□□□□ -2
HOXA3O43365 SNORD15B-201ENST00000384714 146 ntBASIC2.53□□□□□ -2
HOXA3O43365 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
HOXA3O43365 RNU6-1228P-201ENST00000391014 107 ntBASIC2.53□□□□□ -2
HOXA3O43365 AL606845.1-201ENST00000404881 255 ntBASIC2.53□□□□□ -2
HOXA3O43365 RNA5SP229-201ENST00000410809 99 ntBASIC2.53□□□□□ -2
HOXA3O43365 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.53□□□□□ -2
HOXA3O43365 AC022018.1-201ENST00000430685 241 ntBASIC2.53□□□□□ -2
HOXA3O43365 AL162725.1-201ENST00000435405 301 ntBASIC2.53□□□□□ -2
HOXA3O43365 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.53□□□□□ -2
HOXA3O43365 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.53□□□□□ -2
HOXA3O43365 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.53□□□□□ -2
HOXA3O43365 AC090616.3-201ENST00000582184 217 ntBASIC2.53□□□□□ -2
HOXA3O43365 MIR4506-201ENST00000584693 77 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms