Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.42□□□□□ -2.02
PHGDHO43175 Y_RNA.288-201ENST00000364854 92 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 MIR518C-201ENST00000384822 101 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 AL031003.1-201ENST00000404229 172 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 AL355796.1-201ENST00000406706 323 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 RNA5SP184-201ENST00000411071 108 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 RNU6-1132P-201ENST00000459214 107 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 AL049873.1-201ENST00000480540 376 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 RN7SL636P-201ENST00000497504 294 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 MTND1P19-201ENST00000511780 315 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 RNA5SP356-201ENST00000515972 94 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 RNU7-193P-201ENST00000516723 65 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 SCARNA24.2-201ENST00000516968 130 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 AC023157.2-201ENST00000540596 141 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 AC006006.1-201ENST00000603082 144 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 AC005828.6-201ENST00000606610 232 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 AC245884.12-201ENST00000615364 59 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
PHGDHO43175 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PHGDHO43175 MTND5P6-201ENST00000422338 1798 ntBASIC2.41□□□□□ -2.02
PHGDHO43175 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
PHGDHO43175 snoU2-30.2-201ENST00000362805 70 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 Y_RNA.307-201ENST00000365022 117 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 Y_RNA.329-201ENST00000365209 107 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 RNU6-407P-201ENST00000365280 104 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 Y_RNA.383-201ENST00000383855 97 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 MIR597-201ENST00000384968 97 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 MIR524-201ENST00000385242 87 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.4□□□□□ -2.03
PHGDHO43175 AL121890.1-201ENST00000435457 205 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.4□□□□□ -2.03
PHGDHO43175 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.4□□□□□ -2.03
PHGDHO43175 RNU6-436P-201ENST00000516171 114 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.4□□□□□ -2.03
PHGDHO43175 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.4□□□□□ -2.03
PHGDHO43175 AC012433.1-201ENST00000588916 398 ntBASIC2.4□□□□□ -2.03
PHGDHO43175 RNA5SP393-201ENST00000363423 117 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 RNU6-271P-201ENST00000363858 105 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 SNORA67.1-201ENST00000364749 141 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 Y_RNA.401-201ENST00000383965 117 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 RNU6-417P-201ENST00000384712 107 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 Y_RNA.569-201ENST00000384749 103 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 SNORA53-201ENST00000391141 249 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 RNA5SP465-201ENST00000391195 109 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 AC108938.1-201ENST00000451204 136 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 RPS27P22-201ENST00000478056 241 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 YWHAEP4-201ENST00000505390 198 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 RNU6-1338P-201ENST00000516328 91 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 SNORA31.25-201ENST00000517242 134 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 MIR3145-201ENST00000580727 82 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 AC010900.2-201ENST00000604508 210 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 AC037487.3-201ENST00000606668 112 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 AL353149.1-201ENST00000610667 244 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 AC006435.5-201ENST00000624486 112 ntBASIC2.39□□□□□ -2.03
PHGDHO43175 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
PHGDHO43175 AC062016.1-201ENST00000355719 319 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 SNORA27.1-201ENST00000362604 124 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 Y_RNA.111-201ENST00000363248 100 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 Y_RNA.477-201ENST00000384352 108 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 MIR196B-201ENST00000384852 84 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 MIR873-201ENST00000401120 77 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 MIR1283-2-201ENST00000408621 87 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
PHGDHO43175 HMGN2P3-201ENST00000433603 273 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 HMGN2P5-201ENST00000436882 273 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 MRPS10P1-201ENST00000448483 130 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 SNORA70.12-201ENST00000516084 153 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.38□□□□□ -2.03
PHGDHO43175 AL137100.2-201ENST00000555786 315 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 AC110588.1-201ENST00000559699 137 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 DEFB117-201ENST00000602356 141 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 RPL12P50-201ENST00000603116 116 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 U4.3-201ENST00000621047 82 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 AC127459.3-201ENST00000624328 466 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 MIR338-201ENST00000636369 67 ntBASIC2.38□□□□□ -2.03
PHGDHO43175 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PHGDHO43175 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.37□□□□□ -2.03
PHGDHO43175 AL391987.6-201ENST00000305671 199 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 Y_RNA.14-201ENST00000362415 103 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 RNU6-862P-201ENST00000362804 105 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 Y_RNA.124-201ENST00000363339 93 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 Y_RNA.287-201ENST00000364853 94 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 RNU1-138P-201ENST00000384093 164 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 Y_RNA.447-201ENST00000384184 113 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 AC024067.1-201ENST00000426199 223 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.37□□□□□ -2.03
PHGDHO43175 RPL23AP7-203ENST00000449021 469 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 HMGB3P3-201ENST00000510526 400 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 RNA5SP20-201ENST00000515976 84 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 AC005786.1-201ENST00000588553 154 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 AC067747.1-201ENST00000608026 250 ntBASIC2.37□□□□□ -2.03
PHGDHO43175 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PHGDHO43175 Y_RNA.361-201ENST00000365515 120 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 Y_RNA.418-201ENST00000384029 102 ntBASIC2.36□□□□□ -2.03
PHGDHO43175 Y_RNA.518-201ENST00000384552 113 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms