Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AP002001.1-203ENST00000534002 267 ntBASIC2.92□□□□□ -1.94
FOXN1O15353 AC021231.3-201ENST00000558497 370 ntBASIC2.92□□□□□ -1.94
FOXN1O15353 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXN1O15353 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.92□□□□□ -1.94
FOXN1O15353 Y_RNA.778-201ENST00000620203 90 ntBASIC2.92□□□□□ -1.94
FOXN1O15353 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
FOXN1O15353 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.92□□□□□ -1.94
FOXN1O15353 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
FOXN1O15353 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.91□□□□□ -1.94
FOXN1O15353 Y_RNA.261-201ENST00000364631 102 ntBASIC2.91□□□□□ -1.94
FOXN1O15353 SNORA40.19-201ENST00000390846 128 ntBASIC2.91□□□□□ -1.94
FOXN1O15353 CYCSP49-201ENST00000420810 319 ntBASIC2.91□□□□□ -1.94
FOXN1O15353 AC010409.1-201ENST00000487382 476 ntBASIC2.91□□□□□ -1.94
FOXN1O15353 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.91□□□□□ -1.94
FOXN1O15353 MIR6873-201ENST00000622788 63 ntBASIC2.91□□□□□ -1.94
FOXN1O15353 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXN1O15353 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
FOXN1O15353 AC092268.1-201ENST00000342691 405 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
FOXN1O15353 Y_RNA.121-201ENST00000363309 113 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 SNORA25.6-201ENST00000364121 118 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 RNU4-17P-201ENST00000365598 141 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.9□□□□□ -1.95
FOXN1O15353 U8.19-201ENST00000459095 133 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 AC091179.3-201ENST00000474761 144 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 AC005840.1-201ENST00000498412 377 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXN1O15353 RNU6-581P-201ENST00000516214 105 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 CYCSP23-201ENST00000519781 313 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXN1O15353 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.9□□□□□ -1.95
FOXN1O15353 MIR3684-201ENST00000579779 74 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 AC103810.6-201ENST00000606708 136 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.9□□□□□ -1.95
FOXN1O15353 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
FOXN1O15353 AC007336.1-201ENST00000576365 3828 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 RNU6-799P-201ENST00000363567 107 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 Y_RNA.329-201ENST00000365209 107 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 RNU6-1280P-201ENST00000365211 107 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 RNU6-793P-201ENST00000384233 104 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 AL359511.1-201ENST00000402970 211 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 RNU2-54P-201ENST00000410299 190 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 RPS26P42-201ENST00000413485 326 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 Z98742.2-201ENST00000431564 187 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 RPL39P29-201ENST00000447779 157 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 RPS29P20-201ENST00000489592 171 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 SNORA31.16-201ENST00000516773 139 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 HSPE1P18-201ENST00000517602 280 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.89□□□□□ -1.95
FOXN1O15353 AC007536.1-201ENST00000533382 349 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
FOXN1O15353 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.89□□□□□ -1.95
FOXN1O15353 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.89□□□□□ -1.95
FOXN1O15353 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXN1O15353 AC099654.7-201ENST00000635788 2127 ntBASIC2.89□□□□□ -1.95
FOXN1O15353 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXN1O15353 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
FOXN1O15353 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
FOXN1O15353 AC010332.2-201ENST00000613083 1904 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 RNU6-727P-201ENST00000363592 107 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 RNA5SP205-201ENST00000364653 136 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 Y_RNA.353-201ENST00000365440 108 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 U8.13-201ENST00000390842 128 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 RNU6-763P-201ENST00000390865 106 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 RNU6-239P-201ENST00000390990 99 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 SNORA26.3-201ENST00000391119 136 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 MIR888-201ENST00000401186 77 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 CR769767.1-201ENST00000436337 346 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 AC008267.6-201ENST00000441664 139 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 AC010099.1-201ENST00000455434 375 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 AC007215.1-201ENST00000464893 276 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 RPS27AP10-201ENST00000496103 208 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 RNU7-121P-201ENST00000516604 62 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 RNU6-928P-201ENST00000516876 104 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 DEFB131C-201ENST00000528817 165 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 MIR548X2-201ENST00000579776 100 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.88□□□□□ -1.95
FOXN1O15353 MIR3529-201ENST00000637713 78 ntBASIC2.88□□□□□ -1.95
FOXN1O15353 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
FOXN1O15353 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
FOXN1O15353 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.88□□□□□ -1.95
FOXN1O15353 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
FOXN1O15353 AC110774.1-201ENST00000623567 2018 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNA5SP325-201ENST00000363756 130 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNU5F-3P-201ENST00000363767 117 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNU6-275P-201ENST00000364910 107 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNU6-215P-201ENST00000365169 102 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNU6-44P-201ENST00000384045 107 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNU6-1310P-201ENST00000384153 107 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNU6-1248P-201ENST00000391096 64 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 AC099548.1-201ENST00000421443 426 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 AC019205.3-201ENST00000424573 156 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXN1O15353 AL714022.1-201ENST00000439897 151 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.87□□□□□ -1.95
FOXN1O15353 RPS20P10-201ENST00000451209 253 ntBASIC2.87□□□□□ -1.95
FOXN1O15353 AC114982.1-201ENST00000469402 321 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms