Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.27□□□□□ -2.45
HMGB3O15347 RNA5SP94-201ENST00000516917 108 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 SCOCP1-201ENST00000554676 349 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 MTND4P33-201ENST00000556706 766 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 SNORA25.18-201ENST00000607153 114 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 AC006566.1-201ENST00000608943 513 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 U2.17-201ENST00000611454 95 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 AC068137.4-201ENST00000638485 296 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 AC027514.1-201ENST00000588561 1603 ntBASIC-0.27□□□□□ -2.45
HMGB3O15347 SNORD114-5-201ENST00000362928 70 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 RNU6-784P-201ENST00000384330 106 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 MIR136-201ENST00000385207 82 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 AL049545.1-201ENST00000401856 572 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 RNU2-29P-201ENST00000410423 189 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 SSR1P2-201ENST00000415208 787 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 PIGPP3-201ENST00000425307 415 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 AC005534.2-201ENST00000431047 433 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.28□□□□□ -2.45
HMGB3O15347 AC114811.1-201ENST00000507207 168 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 AL137161.1-201ENST00000532231 390 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 AC064836.2-201ENST00000609491 462 ntBASIC-0.28□□□□□ -2.45
HMGB3O15347 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 RNU6-222P-201ENST00000362438 107 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 AC117470.1-201ENST00000381974 330 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 RNU6-906P-201ENST00000384700 70 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 RNA5SP63-201ENST00000391225 112 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 AL590632.1-201ENST00000424289 371 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.29□□□□□ -2.46
HMGB3O15347 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.29□□□□□ -2.46
HMGB3O15347 RPS3AP17-201ENST00000472594 777 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 RNU6-977P-201ENST00000516411 103 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 SNORA25.14-201ENST00000516481 132 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 MIR548AO-201ENST00000579992 96 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 MIR7844-201ENST00000616161 122 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 uc_338.16-201ENST00000621804 95 ntBASIC-0.29□□□□□ -2.46
HMGB3O15347 MTND4P12-201ENST00000498999 1377 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 SNORD114-26-201ENST00000363543 72 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 U8.7-201ENST00000364940 136 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 RNU6-580P-201ENST00000365159 107 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 Y_RNA.354-201ENST00000365448 111 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 SNORA8.2-201ENST00000384372 139 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 MIR15B-201ENST00000385045 98 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 SNORA75.6-201ENST00000391318 127 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 AC243428.1-201ENST00000421099 264 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.3□□□□□ -2.46
HMGB3O15347 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.3□□□□□ -2.46
HMGB3O15347 SNORA40.12-201ENST00000516329 111 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 SNORA18.7-201ENST00000516910 131 ntBASIC-0.3□□□□□ -2.46
HMGB3O15347 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.3□□□□□ -2.46
HMGB3O15347 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.3□□□□□ -2.46
HMGB3O15347 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 RNU6V-201ENST00000384105 107 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 RNU6-514P-201ENST00000384208 107 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 RNU6-606P-201ENST00000384721 111 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 MIR516B2-201ENST00000385190 85 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 AC009961.2-201ENST00000435771 251 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.31□□□□□ -2.46
HMGB3O15347 snoU13.18-201ENST00000459483 104 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 MIR2115-201ENST00000516657 100 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 MTND2P38-201ENST00000522536 667 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.31□□□□□ -2.46
HMGB3O15347 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.31□□□□□ -2.46
HMGB3O15347 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.31□□□□□ -2.46
HMGB3O15347 MIR3682-201ENST00000581338 84 ntBASIC-0.31□□□□□ -2.46
HMGB3O15347 SNORD113-6-201ENST00000363345 75 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 RNU6-302P-201ENST00000365249 107 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 SNORA20B-201ENST00000384220 132 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.32□□□□□ -2.46
HMGB3O15347 RPL23AP91-201ENST00000569211 455 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.32□□□□□ -2.46
HMGB3O15347 MIR4804-201ENST00000581683 73 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 Z84480.1-201ENST00000605131 311 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 MIR98-201ENST00000606724 119 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.32□□□□□ -2.46
HMGB3O15347 MIR4251-201ENST00000635819 61 ntBASIC-0.32□□□□□ -2.46
HMGB3O15347 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 RNY4P34-201ENST00000364779 95 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 RNU6-376P-201ENST00000384731 106 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 SNORD100-201ENST00000408573 76 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.33□□□□□ -2.46
HMGB3O15347 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.33□□□□□ -2.46
HMGB3O15347 RPL23AP54-201ENST00000495129 419 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 RNA5SP20-201ENST00000515976 84 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.33□□□□□ -2.46
HMGB3O15347 MIR4509-3-201ENST00000578671 94 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 MIR4509-2-201ENST00000583920 94 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 MIR8076-201ENST00000611401 83 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 MIR4509-1-201ENST00000618224 94 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 MIR6515-201ENST00000619843 57 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.33□□□□□ -2.46
HMGB3O15347 AC007671.2-201ENST00000637344 619 ntBASIC-0.33□□□□□ -2.46
HMGB3O15347 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms