Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.99□□□□□ -2.09
NPHP1O15259 AC024614.2-201ENST00000577584 372 ntBASIC1.99□□□□□ -2.09
NPHP1O15259 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.99□□□□□ -2.09
NPHP1O15259 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.99□□□□□ -2.09
NPHP1O15259 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
NPHP1O15259 ZNF209P-201ENST00000593450 2304 ntBASIC1.99□□□□□ -2.09
NPHP1O15259 Y_RNA.116-201ENST00000363292 103 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 RNU6-1145P-201ENST00000384246 107 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 MIR517C-201ENST00000385103 95 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 RNU6-370P-201ENST00000411008 104 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 AL161935.2-201ENST00000414627 60 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 AC092423.1-201ENST00000430165 186 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 UBE2V1P7-201ENST00000446395 340 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 HSPE1P24-201ENST00000450782 238 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 RPS26P45-201ENST00000471748 340 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 HMGN1P12-201ENST00000499125 195 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 RNU6-107P-201ENST00000516643 102 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 RNU1-142P-201ENST00000516682 145 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 RNU7-128P-201ENST00000517247 62 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 CYCSP23-201ENST00000519781 313 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 AL161670.1-201ENST00000554348 137 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 U6.73-201ENST00000619194 103 ntBASIC1.98□□□□□ -2.09
NPHP1O15259 WWP1P1-201ENST00000466609 2769 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 MIR302D-201ENST00000362275 68 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 RNA5SP361-201ENST00000362686 118 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 RNU6-203P-201ENST00000384038 104 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 RNA5SP109-201ENST00000391010 116 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 ELOCP21-201ENST00000412558 336 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.97□□□□□ -2.09
NPHP1O15259 RPL23AP50-201ENST00000434149 455 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 AL606517.2-201ENST00000442855 241 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 RPS27P1-201ENST00000450552 247 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 SNORD65B-201ENST00000459126 73 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 SNORA31.24-201ENST00000517232 57 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 APOOP3-201ENST00000536787 586 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 AL137100.2-201ENST00000555786 315 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 AL357075.2-201ENST00000614906 189 ntBASIC1.97□□□□□ -2.09
NPHP1O15259 SNORD48-201ENST00000364953 64 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 Y_RNA.358-201ENST00000365491 99 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 MIR194-1-201ENST00000384892 85 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 COX6CP10-201ENST00000416832 224 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 AC005002.2-201ENST00000438228 269 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 AC098614.3-201ENST00000438957 440 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 UQCRBP2-201ENST00000447827 297 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.96□□□□□ -2.1
NPHP1O15259 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.96□□□□□ -2.1
NPHP1O15259 MIR4422-201ENST00000581938 83 ntBASIC1.96□□□□□ -2.1
NPHP1O15259 RNU6-1188P-201ENST00000363795 107 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 RNU6-879P-201ENST00000364328 108 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 Y_RNA.474-201ENST00000384341 102 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 MIR4709-201ENST00000577272 72 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 AL355073.2-201ENST00000612106 557 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 MIR1244-1-201ENST00000612829 85 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NPHP1O15259 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.95□□□□□ -2.1
NPHP1O15259 MIR1244-3-201ENST00000635744 85 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 MIR1244-2-201ENST00000636449 85 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 MIR1244-4-202ENST00000636813 85 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 ICE2P2-201ENST00000483823 2787 ntBASIC1.95□□□□□ -2.1
NPHP1O15259 RNU6-271P-201ENST00000363858 105 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 RNU6-99P-201ENST00000364721 107 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 RNU6-1264P-201ENST00000383891 107 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 RNU1-78P-201ENST00000391248 165 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 RPL21P1-201ENST00000399532 476 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 MIR1323-201ENST00000408090 73 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 RNU6-1186P-201ENST00000410429 97 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 Y_RNA.646-201ENST00000410980 101 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 RN7SKP49-201ENST00000516675 260 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 AC022868.1-201ENST00000517767 391 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHP1O15259 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHP1O15259 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.94□□□□□ -2.1
NPHP1O15259 MIR4421-201ENST00000578133 69 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 AC022217.4-201ENST00000604389 163 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 AC104260.1-201ENST00000616660 539 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 AC006435.5-201ENST00000624486 112 ntBASIC1.94□□□□□ -2.1
NPHP1O15259 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
NPHP1O15259 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NPHP1O15259 RNU6-318P-201ENST00000384283 103 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 RNU6-310P-201ENST00000384655 107 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 SNORA75.6-201ENST00000391318 127 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP1O15259 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.93□□□□□ -2.1
NPHP1O15259 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.93□□□□□ -2.1
NPHP1O15259 AC074133.1-201ENST00000515696 183 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 RNU7-99P-201ENST00000516271 62 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 RBM11P1-201ENST00000604951 799 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.93□□□□□ -2.1
NPHP1O15259 MIR8063-201ENST00000621930 81 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 AC091895.1-201ENST00000624494 256 ntBASIC1.93□□□□□ -2.1
NPHP1O15259 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NPHP1O15259 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.92□□□□□ -2.1
NPHP1O15259 Y_RNA.67-201ENST00000362870 100 ntBASIC1.92□□□□□ -2.1
NPHP1O15259 RNU6-392P-201ENST00000364926 101 ntBASIC1.92□□□□□ -2.1
NPHP1O15259 SNORD1A-201ENST00000364968 72 ntBASIC1.92□□□□□ -2.1
NPHP1O15259 RPS20P15-201ENST00000412792 311 ntBASIC1.92□□□□□ -2.1
NPHP1O15259 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.92□□□□□ -2.1
NPHP1O15259 MRPS10P1-201ENST00000448483 130 ntBASIC1.92□□□□□ -2.1
NPHP1O15259 PCNPP5-201ENST00000452246 481 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms