Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
FOXN3O00409 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
FOXN3O00409 Y_RNA.65-201ENST00000362846 100 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RNU6-23P-201ENST00000363283 107 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 U3.8-201ENST00000363675 217 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 SNORD114-30-201ENST00000364448 72 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 Y_RNA.277-201ENST00000364754 102 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 SNORA72.2-201ENST00000365028 127 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RNA5SP126-201ENST00000365092 109 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RNU6-20P-201ENST00000384106 107 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RNU6-301P-201ENST00000384277 107 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 Y_RNA.581-201ENST00000391017 97 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RNU11-3P-201ENST00000391111 133 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RAB28P5-201ENST00000427490 651 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RN7SL429P-201ENST00000479090 223 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RN7SL489P-201ENST00000486185 223 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RN7SL327P-201ENST00000488659 223 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RN7SL636P-201ENST00000497504 294 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 RNU6-496P-201ENST00000516145 99 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.49□□□□□ -2.01
FOXN3O00409 RN7SL853P-201ENST00000617250 223 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 snoZ196.1-201ENST00000625269 89 ntBASIC2.49□□□□□ -2.01
FOXN3O00409 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
FOXN3O00409 Z82195.2-201ENST00000612348 18351 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
FOXN3O00409 AL159152.1-201ENST00000635019 2587 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 MIR410-201ENST00000362222 80 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 RNU6-626P-201ENST00000363354 107 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 RNU6-1164P-201ENST00000364428 107 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 RNU6-338P-201ENST00000383888 105 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 Y_RNA.539-201ENST00000384635 107 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 MIR597-201ENST00000384968 97 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 RNA5SP475-201ENST00000410568 110 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXN3O00409 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.48□□□□□ -2.01
FOXN3O00409 RNA5SP137-201ENST00000516833 135 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 AC055872.1-201ENST00000570978 278 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXN3O00409 CTSLP2-204ENST00000629029 392 ntBASIC2.48□□□□□ -2.01
FOXN3O00409 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.48□□□□□ -2.01
FOXN3O00409 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
FOXN3O00409 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXN3O00409 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXN3O00409 AL136360.1-201ENST00000503377 1900 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 MIR340-201ENST00000362125 95 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 RNU6-1266P-201ENST00000362794 105 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 SNORA67.4-201ENST00000384688 142 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 RNU6-21P-201ENST00000384710 107 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.47□□□□□ -2.01
FOXN3O00409 MTND5P15-201ENST00000434246 349 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 MTCO1P44-201ENST00000441935 243 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 RNU6-966P-201ENST00000516479 104 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 AC027419.1-201ENST00000522976 328 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 MIR5007-201ENST00000583098 95 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 AC078899.2-201ENST00000595282 212 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 AC011373.1-201ENST00000607270 237 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 IGHVIII-44-202ENST00000636235 289 ntBASIC2.47□□□□□ -2.01
FOXN3O00409 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.47□□□□□ -2.01
FOXN3O00409 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
FOXN3O00409 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.46□□□□□ -2.02
FOXN3O00409 RNA5SP289-201ENST00000362332 137 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 RNA5SP493-201ENST00000364115 91 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 RNU6-1175P-201ENST00000365200 107 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 RNU6-290P-201ENST00000365212 101 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 RNU6-1264P-201ENST00000383891 107 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 Y_RNA.416-201ENST00000384014 113 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 Y_RNA.518-201ENST00000384552 113 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 RNU6-1235P-201ENST00000384559 107 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 MIR518A2-201ENST00000384966 87 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 MIR29C-201ENST00000385231 88 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
FOXN3O00409 HMGN2P39-201ENST00000398005 273 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 MIR548H3-201ENST00000408771 118 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 RNU6-498P-201ENST00000459468 107 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.46□□□□□ -2.02
FOXN3O00409 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.46□□□□□ -2.02
FOXN3O00409 MIR6766-201ENST00000622641 72 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 MIR3674-201ENST00000636576 68 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.46□□□□□ -2.02
FOXN3O00409 AC009487.4-201ENST00000624969 3585 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
FOXN3O00409 ZNF658B-202ENST00000615961 3375 ntBASIC2.46□□□□□ -2.02
FOXN3O00409 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
FOXN3O00409 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
FOXN3O00409 RNU4-90P-201ENST00000362773 141 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 Y_RNA.515-201ENST00000384535 112 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 RN7SKP284-201ENST00000411002 343 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 MRPS10P1-201ENST00000448483 130 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 RNU6-138P-201ENST00000515952 107 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 RNU6-1041P-201ENST00000516254 102 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 MIR4643-201ENST00000577473 78 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.45□□□□□ -2.02
FOXN3O00409 AC004467.1-201ENST00000615678 330 ntBASIC2.45□□□□□ -2.02
FOXN3O00409 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms