Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SNORD65B-201ENST00000459126 73 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 AC025465.3-201ENST00000510570 311 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 AL137100.2-201ENST00000555786 315 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 AC080078.3-201ENST00000605407 463 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 AL359075.3-201ENST00000613288 217 ntBASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NPIPA3F8WFD2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.70-201ENST00000362886 110 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.263-201ENST00000364659 114 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 SNORA4.2-201ENST00000365313 147 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 RNA5SP109-201ENST00000391010 116 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.592-201ENST00000410274 109 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 RPS20P15-201ENST00000412792 311 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 RPL23AP36-201ENST00000413895 458 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 MTCO2P27-201ENST00000420740 428 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 MTND4P28-201ENST00000426217 387 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 RNU6-625P-201ENST00000459412 107 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC005908.1-201ENST00000468701 347 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 FGF7P4-201ENST00000509595 295 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC008834.1-201ENST00000511612 175 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC108729.3-201ENST00000513484 108 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC074133.1-201ENST00000515696 183 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 SNORA40.9-201ENST00000515895 93 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 RNA5SP481-201ENST00000516814 122 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 RNU7-4P-201ENST00000516961 62 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 MIR2355-201ENST00000517199 87 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC144568.1-201ENST00000520139 137 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC024995.1-201ENST00000523014 93 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC022432.1-201ENST00000595739 310 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 AC112487.2-201ENST00000637950 304 ntBASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
NPIPA3F8WFD2 MIR378A-201ENST00000362177 66 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 RNU6-490P-201ENST00000362985 107 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 RNU6-1264P-201ENST00000383891 107 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 RNU6-926P-201ENST00000384075 107 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 COX6CP10-201ENST00000416832 224 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC112492.4-201ENST00000456549 352 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 RPS27P22-201ENST00000478056 241 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC010469.2-201ENST00000496412 480 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 RNU6-699P-201ENST00000517081 110 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC100821.1-201ENST00000523153 2479 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC023157.2-201ENST00000540596 141 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC093027.1-201ENST00000546698 429 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 MIR3198-2-201ENST00000577868 80 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 Y_RNA.804-201ENST00000615262 101 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 U6.73-201ENST00000619194 103 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 U6.108-201ENST00000637764 58 ntBASIC1.53□□□□□ -2.16
NPIPA3F8WFD2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
NPIPA3F8WFD2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.58-201ENST00000362807 102 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.154-201ENST00000363624 102 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 RNY3P1-201ENST00000365085 102 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 RNY3-201ENST00000365484 102 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 MIR559-201ENST00000385188 96 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 MIR934-201ENST00000401241 83 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 RNA5SP475-201ENST00000410568 110 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 AC096644.2-201ENST00000429278 159 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 snoU13.27-201ENST00000459278 104 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 RPL26P26-201ENST00000480251 434 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 AC010598.1-201ENST00000510378 103 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 RNU6-408P-201ENST00000515910 100 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 MIR4438-201ENST00000585271 93 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 AC016925.2-201ENST00000605108 242 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
NPIPA3F8WFD2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 RNU6-1040P-201ENST00000383974 107 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 RPL21P1-201ENST00000399532 476 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 BTF3P4-201ENST00000418852 495 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 RAB28P5-201ENST00000427490 651 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 JTBP1-201ENST00000441314 247 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 AL606517.2-201ENST00000442855 241 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 SNORD19B-201ENST00000459623 84 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 AP002001.1-203ENST00000534002 267 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 MIR4709-201ENST00000577272 72 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 AP001094.1-201ENST00000579805 193 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms