Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SRIP3-201ENST00000413200 219 ntBASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 HMGN1P13-201ENST00000505795 138 ntBASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 AC005899.2-201ENST00000584353 90 ntBASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 AC010999.1-201ENST00000611856 324 ntBASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 U2.1-201ENST00000618978 145 ntBASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 AC008873.1-201ENST00000625051 138 ntBASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
TRIM49D1C9J1S8 RNU1-58P-201ENST00000362413 163 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-862P-201ENST00000362804 105 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.179-201ENST00000363844 90 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 SNORA22B-201ENST00000383876 138 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.395-201ENST00000383945 109 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.445-201ENST00000384168 102 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-439P-201ENST00000384188 106 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-1145P-201ENST00000384246 107 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-975P-201ENST00000384296 105 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 SNORA69.1-201ENST00000390904 137 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AL117342.1-201ENST00000404861 406 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 SNORD12B-201ENST00000410433 91 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 MCFD2P1-201ENST00000417812 300 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 MTCO2P12-201ENST00000427426 682 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC236972.2-201ENST00000434979 310 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC005002.2-201ENST00000438228 269 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 MTND4P19-201ENST00000446659 478 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU7-57P-201ENST00000459540 60 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 SNORA40.9-201ENST00000515895 93 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-970P-201ENST00000516312 107 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-107P-201ENST00000516643 102 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.701-201ENST00000516812 110 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 RN7SKP295-201ENST00000517264 153 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 SNORD11B-201ENST00000607707 90 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC090574.1-201ENST00000623186 233 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC068205.3-201ENST00000636385 468 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 AC245060.5-201ENST00000610778 3293 ntBASIC1.36□□□□□ -2.19
TRIM49D1C9J1S8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-661P-201ENST00000362409 107 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.26-201ENST00000362539 101 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.99-201ENST00000363138 105 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.124-201ENST00000363339 93 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.287-201ENST00000364853 94 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.605-201ENST00000410577 105 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AC114482.1-201ENST00000418010 247 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 MTND4P28-201ENST00000426217 387 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AL606517.2-201ENST00000442855 241 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 HSPE1P24-201ENST00000450782 238 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-344P-201ENST00000516635 111 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-264P-201ENST00000517134 104 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AC087441.2-201ENST00000529141 262 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AC023442.1-201ENST00000531247 422 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AC026470.2-201ENST00000561492 181 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 MIR3171-201ENST00000584270 74 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AC083806.3-201ENST00000614016 455 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AC090971.5-201ENST00000621102 293 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 AL078596.1-201ENST00000624856 447 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.35□□□□□ -2.19
TRIM49D1C9J1S8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AL159152.1-201ENST00000635019 2587 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.101-201ENST00000363154 102 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.105-201ENST00000363182 111 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.252-201ENST00000364556 101 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-203P-201ENST00000384038 104 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MIR586-201ENST00000385035 97 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MIR625-201ENST00000385047 85 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MIR29C-201ENST00000385231 88 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNA5SP465-201ENST00000391195 109 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNA5SP467-201ENST00000391274 118 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 HMGN2P34-201ENST00000437647 269 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 MTCYBP6-201ENST00000441810 138 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 UQCRBP2-201ENST00000447827 297 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-408P-201ENST00000515910 100 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-397P-201ENST00000516226 104 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.683-201ENST00000516508 93 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNA5SP54-201ENST00000516951 92 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 RNU6-856P-201ENST00000516959 98 ntBASIC1.34□□□□□ -2.19
TRIM49D1C9J1S8 Y_RNA.711-201ENST00000516993 102 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms