Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 Y_RNA.594-201ENST00000410373 140 ntBASIC1.39□□□□□ -2.19
HMGB1P1B2RPK0 SNORA31.4-201ENST00000516049 129 ntBASIC1.39□□□□□ -2.19
HMGB1P1B2RPK0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.39□□□□□ -2.19
HMGB1P1B2RPK0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
HMGB1P1B2RPK0 AC104260.1-201ENST00000616660 539 ntBASIC1.39□□□□□ -2.19
HMGB1P1B2RPK0 IGHVIII-44-202ENST00000636235 289 ntBASIC1.39□□□□□ -2.19
HMGB1P1B2RPK0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HMGB1P1B2RPK0 SNORA27.1-201ENST00000362604 124 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 RNU4-79P-201ENST00000362764 141 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 Y_RNA.358-201ENST00000365491 99 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 Y_RNA.364-201ENST00000365532 101 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 SNORA70.7-201ENST00000384159 133 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 AL627390.1-201ENST00000396055 340 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-1050P-201ENST00000410388 107 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 RPS3AP52-201ENST00000435639 297 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 RPS29P25-201ENST00000481709 171 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 SNORD116-28-201ENST00000516123 91 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 Y_RNA.670-201ENST00000516255 105 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 AC090049.2-201ENST00000550377 109 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 AC018448.1-201ENST00000552843 316 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 MIR5701-3-201ENST00000578890 82 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 MIR5701-1-201ENST00000585138 82 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 MIR5701-2-201ENST00000615634 82 ntBASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMGB1P1B2RPK0 RNY1P16-201ENST00000363063 111 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RNU1-124P-201ENST00000363861 145 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-1215P-201ENST00000384441 102 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 Y_RNA.510-201ENST00000384511 114 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 AC074085.1-201ENST00000413598 418 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 AC092423.1-201ENST00000430165 186 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-329P-201ENST00000459618 107 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RPL7P42-201ENST00000481005 679 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-322P-201ENST00000516010 103 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RN7SKP49-201ENST00000516675 260 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-1016P-201ENST00000516689 94 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
HMGB1P1B2RPK0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-1145P-201ENST00000384246 107 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 MIR504-201ENST00000385065 83 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 MIR653-201ENST00000385279 96 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 AC245047.7-201ENST00000440265 293 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 PCNPP5-201ENST00000452246 481 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 RN7SKP179-201ENST00000516126 217 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-63P-201ENST00000516690 95 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-341P-201ENST00000516973 96 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 AP002001.1-203ENST00000534002 267 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 AC091178.2-201ENST00000584401 117 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 AL117336.2-201ENST00000602435 335 ntBASIC1.36□□□□□ -2.19
HMGB1P1B2RPK0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-625P-201ENST00000459412 107 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 SNORD124-201ENST00000459577 104 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 AC105313.1-201ENST00000509121 353 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 AP002004.2-201ENST00000531656 154 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 AC009229.3-201ENST00000608056 282 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 U6.115-201ENST00000636045 103 ntBASIC1.35□□□□□ -2.19
HMGB1P1B2RPK0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 RNU11-5P-201ENST00000391216 129 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 RNA5SP475-201ENST00000410568 110 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 AC022493.2-201ENST00000506122 481 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 MIR4648-201ENST00000580107 72 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 AC018638.8-201ENST00000588755 281 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 AC090517.2-201ENST00000614966 680 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 U4.5-201ENST00000617137 123 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 AC127459.3-201ENST00000624328 466 ntBASIC1.34□□□□□ -2.19
HMGB1P1B2RPK0 ZNF72P-201ENST00000425869 1908 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 SNORA2.2-201ENST00000365473 135 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 SNORA11-201ENST00000408789 128 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 MTCYBP10-201ENST00000424905 650 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 AL137792.2-201ENST00000443484 235 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 RPL39P39-201ENST00000455840 151 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 AL049830.1-201ENST00000468034 425 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 RPS23P4-201ENST00000487908 423 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 UBL5P1-201ENST00000507979 193 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
HMGB1P1B2RPK0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 RNU6-454P-201ENST00000364292 107 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 RNU6-601P-201ENST00000384540 107 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 RPL23AP50-201ENST00000434149 455 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 SNORA25.15-201ENST00000516487 89 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 RNU7-28P-201ENST00000516759 62 ntBASIC1.32□□□□□ -2.2
HMGB1P1B2RPK0 AC105029.1-201ENST00000520250 669 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms