Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 RN7SKP220-201ENST00000410611 288 ntBASIC3.83□□□□□ -1.8
USP17L4A6NCW7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.83□□□□□ -1.8
USP17L4A6NCW7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.83□□□□□ -1.8
USP17L4A6NCW7 MIR2114-201ENST00000516645 80 ntBASIC3.83□□□□□ -1.8
USP17L4A6NCW7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.83□□□□□ -1.8
USP17L4A6NCW7 MIR4672-201ENST00000583126 81 ntBASIC3.83□□□□□ -1.8
USP17L4A6NCW7 uc_338.25-201ENST00000613756 156 ntBASIC3.83□□□□□ -1.8
USP17L4A6NCW7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.83□□□□□ -1.8
USP17L4A6NCW7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
USP17L4A6NCW7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP17L4A6NCW7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.82□□□□□ -1.8
USP17L4A6NCW7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
USP17L4A6NCW7 Y_RNA.71-201ENST00000362892 104 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 Y_RNA.218-201ENST00000364218 104 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 SNORA71.1-201ENST00000364523 117 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 RPS29P12-201ENST00000460178 152 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 RNU6-1333P-201ENST00000516162 93 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 MIR4438-201ENST00000585271 93 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 RPL12P50-201ENST00000603116 116 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 AC110741.2-201ENST00000605278 268 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 AL021707.8-201ENST00000609428 183 ntBASIC3.82□□□□□ -1.8
USP17L4A6NCW7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP17L4A6NCW7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
USP17L4A6NCW7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
USP17L4A6NCW7 Y_RNA.81-201ENST00000362997 102 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 RNU1-22P-201ENST00000363334 158 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 RNU6-1080P-201ENST00000383982 107 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 SNORD15B-201ENST00000384714 146 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 MIR95-201ENST00000385072 81 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 RNU2-55P-201ENST00000411146 174 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 AC092991.1-201ENST00000477176 376 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 RPS29P21-201ENST00000496272 170 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 AC023141.11-201ENST00000508864 202 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 AC097462.1-201ENST00000514125 324 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 SNORA4.4-201ENST00000515921 135 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 SNORA48.11-201ENST00000517015 89 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 MIR2681-201ENST00000581814 105 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 AL031274.2-201ENST00000599419 203 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 AL359881.1-201ENST00000602916 267 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 AC011603.4-201ENST00000611325 277 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
USP17L4A6NCW7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
USP17L4A6NCW7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.81□□□□□ -1.8
USP17L4A6NCW7 RNU6-743P-201ENST00000364151 106 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 Y_RNA.261-201ENST00000364631 102 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 Y_RNA.273-201ENST00000364703 102 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 RNU6-597P-201ENST00000365620 102 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 Y_RNA.432-201ENST00000384087 111 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 RNU6-460P-201ENST00000391158 108 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
USP17L4A6NCW7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.8□□□□□ -1.8
USP17L4A6NCW7 AC023449.1-201ENST00000454464 154 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.8□□□□□ -1.8
USP17L4A6NCW7 AP001328.1-201ENST00000528550 176 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 MIR4644-201ENST00000579929 84 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 MIR378D2-201ENST00000580636 98 ntBASIC3.8□□□□□ -1.8
USP17L4A6NCW7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP17L4A6NCW7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
USP17L4A6NCW7 RNU6-80P-201ENST00000384195 107 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 MIR1253-201ENST00000408273 105 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 RNU2-63P-201ENST00000410792 194 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AC123900.1-201ENST00000420390 96 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 CST9LP2-201ENST00000437612 320 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 MTCO1P44-201ENST00000441935 243 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 SNRPGP8-201ENST00000454064 226 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AC021205.2-201ENST00000480069 347 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 RNU6-197P-201ENST00000516680 100 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 RNU7-172P-201ENST00000517125 64 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AC090142.3-201ENST00000519012 385 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 PRELID2P1-201ENST00000552837 301 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AL356280.1-201ENST00000603614 379 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.79□□□□□ -1.8
USP17L4A6NCW7 AP001340.1-201ENST00000624405 217 ntBASIC3.79□□□□□ -1.8
USP17L4A6NCW7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP17L4A6NCW7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 AC103988.1-201ENST00000566382 2177 ntBASIC3.78□□□□□ -1.8
USP17L4A6NCW7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 RNU6-588P-201ENST00000410281 105 ntBASIC3.78□□□□□ -1.8
USP17L4A6NCW7 AC245047.4-201ENST00000433189 144 ntBASIC3.78□□□□□ -1.8
USP17L4A6NCW7 AC093331.1-201ENST00000521474 169 ntBASIC3.78□□□□□ -1.8
USP17L4A6NCW7 AL049861.1-201ENST00000603130 150 ntBASIC3.78□□□□□ -1.8
USP17L4A6NCW7 U7.2-201ENST00000607576 63 ntBASIC3.78□□□□□ -1.8
USP17L4A6NCW7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP17L4A6NCW7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.77□□□□□ -1.81
USP17L4A6NCW7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.77□□□□□ -1.81
USP17L4A6NCW7 RNU1-23P-201ENST00000363361 144 ntBASIC3.77□□□□□ -1.81
USP17L4A6NCW7 Y_RNA.203-201ENST00000364106 102 ntBASIC3.77□□□□□ -1.81
USP17L4A6NCW7 RNU6-136P-201ENST00000384663 107 ntBASIC3.77□□□□□ -1.81
USP17L4A6NCW7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.77□□□□□ -1.81
USP17L4A6NCW7 AC093259.1-201ENST00000509755 300 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms