Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SNORD88.1-201ENST00000408684 91 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 AC004866.1-201ENST00000411748 78 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 MRPS10P1-201ENST00000448483 130 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 SNORA40.9-201ENST00000515895 93 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 AC055872.1-201ENST00000570978 278 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 MIR3605-201ENST00000583214 100 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 AL355297.2-201ENST00000604792 129 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 AC104465.1-201ENST00000611365 139 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 AC073349.3-201ENST00000617616 186 ntBASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC187A0A096LP49 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 RNU6-653P-201ENST00000363074 106 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 RNU6-923P-201ENST00000364753 107 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 RNU6-546P-201ENST00000383991 107 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 MIR181A2-201ENST00000384863 110 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 IFNA11P-201ENST00000446352 526 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 RPL23AP3-201ENST00000453844 468 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 RNU5F-4P-201ENST00000516581 114 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 RNU6-826P-201ENST00000516827 104 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 RNU7-110P-201ENST00000516891 62 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AC022616.8-201ENST00000533569 253 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AC008749.1-201ENST00000597650 306 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 AL357075.2-201ENST00000614906 189 ntBASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC187A0A096LP49 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.81-201ENST00000362997 102 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.304-201ENST00000365011 112 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU6-1175P-201ENST00000365200 107 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU6-234P-201ENST00000365229 104 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU6-1130P-201ENST00000365434 107 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU6-22P-201ENST00000384355 107 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU6-1117P-201ENST00000384525 104 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU6-21P-201ENST00000384710 107 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 MIR561-201ENST00000385216 97 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU2-51P-201ENST00000410708 197 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU2-32P-201ENST00000411193 191 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RPS29P6-201ENST00000438196 145 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RPS27AP9-201ENST00000477681 438 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 MIR449C-201ENST00000516047 92 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 RNU6-1098P-201ENST00000516772 96 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 SNORD11B-201ENST00000607707 90 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 U4atac.1-201ENST00000618345 95 ntBASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC187A0A096LP49 ZNF658B-202ENST00000615961 3375 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RNU6-1290P-201ENST00000362957 109 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RNU1-23P-201ENST00000363361 144 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RNU6-727P-201ENST00000363592 107 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.308-201ENST00000365043 101 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RNU6-959P-201ENST00000384671 107 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 MIR592-201ENST00000384959 97 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RNU6-131P-201ENST00000391144 107 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 AL590004.2-201ENST00000404787 371 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RN7SKP192-201ENST00000411291 327 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RPL23AP36-201ENST00000413895 458 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 AL390729.2-201ENST00000416137 156 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 RNU6-479P-201ENST00000516348 105 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 SNORA9.3-201ENST00000516383 129 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.679-201ENST00000516416 91 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 AC233702.2-202ENST00000562547 291 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 MIR5692C2-201ENST00000577959 77 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 AC022441.3-201ENST00000605737 136 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 AC037487.3-201ENST00000606668 112 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC187A0A096LP49 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 Z82195.2-201ENST00000612348 18351 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 Y_RNA.272-201ENST00000364696 102 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 MIR27B-201ENST00000385129 97 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 SNORA3.2-201ENST00000408221 125 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 RNU6-735P-201ENST00000410612 107 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 snoU13.26-201ENST00000459452 105 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 RNU6-965P-201ENST00000516721 96 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 SUMO2P18-201ENST00000518873 252 ntBASIC2.48□□□□□ -2.01
CCDC187A0A096LP49 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms