Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC090115.4-201ENST00000609970 188 ntBASIC3.56□□□□□ -1.84
GPC6Q9Y625 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.56□□□□□ -1.84
GPC6Q9Y625 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.56□□□□□ -1.84
GPC6Q9Y625 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GPC6Q9Y625 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.56□□□□□ -1.84
GPC6Q9Y625 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 AC245060.5-201ENST00000610778 3293 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 MIR372-201ENST00000362225 67 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 RNU6-1138P-201ENST00000365359 106 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 RNU6-546P-201ENST00000383991 107 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 SNORA1-201ENST00000384107 130 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 MIR1193-201ENST00000408109 78 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 AC063976.3-201ENST00000426849 329 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 AC244505.4-201ENST00000434905 287 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 AL161788.1-201ENST00000441805 169 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 AC025750.2-201ENST00000442609 450 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 SSXP5-201ENST00000443473 287 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 AC092185.1-201ENST00000491371 97 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 RN7SKP83-201ENST00000516512 178 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 RNU6-504P-201ENST00000516568 104 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 Y_RNA.694-201ENST00000516677 117 ntBASIC3.55□□□□□ -1.84
GPC6Q9Y625 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
GPC6Q9Y625 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GPC6Q9Y625 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.54□□□□□ -1.84
GPC6Q9Y625 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.54□□□□□ -1.84
GPC6Q9Y625 AC009487.4-201ENST00000624969 3585 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.54□□□□□ -1.84
GPC6Q9Y625 Y_RNA.66-201ENST00000362862 102 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 RNA5SP283-201ENST00000365604 119 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 Y_RNA.528-201ENST00000384575 108 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 RPS27P29-201ENST00000463110 252 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 RNU6-126P-201ENST00000516685 103 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 IGKV1-22-201ENST00000524313 326 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 MIR4738-201ENST00000579134 87 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 AL365205.2-201ENST00000594586 68 ntBASIC3.54□□□□□ -1.84
GPC6Q9Y625 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
GPC6Q9Y625 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
GPC6Q9Y625 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
GPC6Q9Y625 PWAR6-201ENST00000552334 4618 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 RNA5SP125-201ENST00000364843 120 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 SNORA57.3-201ENST00000411095 141 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 MRPS17P9-201ENST00000511924 393 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 AC026402.1-201ENST00000513642 170 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 RNA5SP208-201ENST00000516156 78 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 RNA5SP164-201ENST00000516533 110 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 RNU6-1291P-201ENST00000516591 104 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 NDUFB9P3-201ENST00000521269 501 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.53□□□□□ -1.84
GPC6Q9Y625 MIR3160-1-201ENST00000577972 85 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 MIR4474-201ENST00000579189 78 ntBASIC3.53□□□□□ -1.84
GPC6Q9Y625 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
GPC6Q9Y625 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GPC6Q9Y625 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
GPC6Q9Y625 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
GPC6Q9Y625 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC6Q9Y625 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
GPC6Q9Y625 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC6Q9Y625 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
GPC6Q9Y625 MIRLET7F2-201ENST00000385277 83 ntBASIC3.52□□□□□ -1.85
GPC6Q9Y625 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.52□□□□□ -1.85
GPC6Q9Y625 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
GPC6Q9Y625 MIR6875-201ENST00000617506 72 ntBASIC3.52□□□□□ -1.85
GPC6Q9Y625 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC6Q9Y625 AC080128.1-201ENST00000474389 1917 ntBASIC3.52□□□□□ -1.85
GPC6Q9Y625 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC6Q9Y625 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
GPC6Q9Y625 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
GPC6Q9Y625 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.51□□□□□ -1.85
GPC6Q9Y625 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
GPC6Q9Y625 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
GPC6Q9Y625 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
GPC6Q9Y625 MIR520G-201ENST00000385064 90 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
GPC6Q9Y625 SNORA3.3-201ENST00000408712 125 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 AC007064.1-201ENST00000412238 351 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 SNRPGP10-201ENST00000432323 225 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 NDUFA4P2-201ENST00000489989 244 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 RNU6-412P-201ENST00000516434 106 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 AC018630.3-201ENST00000542637 96 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 CYCSP30-201ENST00000546447 172 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 AC074050.1-201ENST00000563247 211 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 AC106754.2-201ENST00000623006 233 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 MIR7515-201ENST00000637837 67 ntBASIC3.51□□□□□ -1.85
GPC6Q9Y625 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms