Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 MTATP8P1-201ENST00000467115 207 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1045P-201ENST00000516321 107 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNA5SP24-201ENST00000516478 95 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 RNU7-110P-201ENST00000516891 62 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AC087441.2-201ENST00000529141 262 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AC006380.1-201ENST00000603598 186 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AC011373.1-201ENST00000607270 237 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 AC091932.3-201ENST00000624223 323 ntBASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.13□□□□□ -2.07
CLDN16Q9Y5I7 MIR340-201ENST00000362125 95 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 RNU1-58P-201ENST00000362413 163 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1175P-201ENST00000365200 107 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 MIR518A2-201ENST00000384966 87 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 AL512604.1-201ENST00000404812 257 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 AC010655.3-201ENST00000478818 450 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 AC027419.1-201ENST00000522976 328 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 AC055872.1-201ENST00000570978 278 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 AC005034.5-201ENST00000604219 466 ntBASIC2.12□□□□□ -2.07
CLDN16Q9Y5I7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AC009487.4-201ENST00000624969 3585 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.19-201ENST00000362462 99 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-238P-201ENST00000363313 106 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-770P-201ENST00000363929 105 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-21P-201ENST00000384710 107 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AC073910.1-201ENST00000445047 438 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 RNU1-131P-201ENST00000458943 161 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AC008413.1-201ENST00000511864 177 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-856P-201ENST00000516959 98 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AC025647.1-201ENST00000517879 253 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 SUMO2P18-201ENST00000518873 252 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AP002001.1-203ENST00000534002 267 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AC008269.2-201ENST00000561915 1105 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AC136443.5-201ENST00000603741 370 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AL137847.3-201ENST00000611521 109 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 MIR376A1-201ENST00000616574 68 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 AC064859.1-201ENST00000624741 174 ntBASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CLDN16Q9Y5I7 MIR410-201ENST00000362222 80 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.214-201ENST00000364201 112 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 RPL23AP36-201ENST00000413895 458 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 AL390729.2-201ENST00000416137 156 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 Z98742.3-201ENST00000418637 326 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 AC060773.1-201ENST00000421698 310 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 ELOCP20-201ENST00000422460 345 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 HMGN2P34-201ENST00000437647 269 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 AC107222.1-201ENST00000510899 637 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-155P-201ENST00000516347 100 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-635P-201ENST00000516651 102 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN16Q9Y5I7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.101-201ENST00000363154 102 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-324P-201ENST00000363957 106 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-454P-201ENST00000364292 107 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.331-201ENST00000365267 102 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 MIR597-201ENST00000384968 97 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 RNU4-30P-201ENST00000410245 143 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 Y_RNA.602-201ENST00000410535 92 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 RPL23AP6-201ENST00000446637 472 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 AC079804.2-201ENST00000490376 200 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 AC011406.1-201ENST00000512440 370 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1143P-201ENST00000516125 104 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
CLDN16Q9Y5I7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.09□□□□□ -2.08
CLDN16Q9Y5I7 ZNF702P-202ENST00000434269 1966 ntBASIC2.09□□□□□ -2.08
CLDN16Q9Y5I7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.08□□□□□ -2.08
CLDN16Q9Y5I7 SNORD63-201ENST00000384262 68 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms