Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 CENPCP1-201ENST00000533085 2578 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 Y_RNA.435-201ENST00000384095 112 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA54-201ENST00000384281 123 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-918P-201ENST00000391219 106 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 AL355497.1-201ENST00000406262 551 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 RPS20P10-201ENST00000451209 253 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 AC107393.1-201ENST00000512403 346 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 AC007536.1-201ENST00000533382 349 ntBASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHA9Q9Y5H5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 SNORD46.1-201ENST00000364139 104 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 RNA5SP387-201ENST00000364226 106 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-407P-201ENST00000365280 104 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-47P-201ENST00000383866 107 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-886P-201ENST00000384319 105 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 EDDM3CP-201ENST00000415977 425 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 AC008885.1-201ENST00000514930 301 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 RNU6-56P-201ENST00000516986 93 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 SUMO2P18-201ENST00000518873 252 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 AC007179.3-201ENST00000604976 235 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.15-201ENST00000611544 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.16-201ENST00000613119 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.12-201ENST00000613778 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.20-201ENST00000613956 192 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.9-201ENST00000615427 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.11-201ENST00000616345 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.2-201ENST00000616535 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.3-201ENST00000617785 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.19-201ENST00000618602 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 RNU2-1-201ENST00000618664 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.6-201ENST00000619225 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.5-201ENST00000619465 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 U2.10-201ENST00000620268 191 ntBASIC2.84□□□□□ -1.95
PCDHA9Q9Y5H5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PCDHA9Q9Y5H5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PCDHA9Q9Y5H5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.308-201ENST00000365043 101 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 SNORD88.1-201ENST00000408684 91 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 RN7SKP284-201ENST00000411002 343 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 RNU1-131P-201ENST00000458943 161 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-1146P-201ENST00000516282 102 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 RNY3P16-201ENST00000516338 101 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 MIR6733-201ENST00000635723 61 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 AC073346.2-201ENST00000624724 2058 ntBASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHA9Q9Y5H5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 RNU1-35P-201ENST00000362782 153 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 RNA5SP374-201ENST00000362939 125 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.172-201ENST00000363765 102 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-144P-201ENST00000383951 107 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 MTCO2P33-201ENST00000402100 465 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AC060773.1-201ENST00000421698 310 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AC104332.1-201ENST00000440471 797 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 RNU7-141P-201ENST00000459304 62 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AC027419.1-201ENST00000522976 328 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AL137100.2-201ENST00000555786 315 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 MIR5688-201ENST00000580619 83 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
PCDHA9Q9Y5H5 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.150-201ENST00000363562 102 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-682P-201ENST00000363843 106 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-1048P-201ENST00000364054 107 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 Y_RNA.233-201ENST00000364407 101 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-923P-201ENST00000364753 107 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-1062P-201ENST00000383908 107 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 RNU6-1323P-201ENST00000384025 107 ntBASIC2.81□□□□□ -1.96
PCDHA9Q9Y5H5 MIR518C-201ENST00000384822 101 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms