Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NAMPTP3-201ENST00000569273 224 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 MIR4802-201ENST00000581881 80 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 MIR548AD-201ENST00000584780 82 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 AC138649.3-201ENST00000622154 254 ntBASIC-1.05□□□□□ -2.58
AP4S1Q9Y587 RNA5SP98-201ENST00000363158 137 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 RNU6-371P-201ENST00000364283 108 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 RNU6-205P-201ENST00000390858 107 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 CALM2P2-201ENST00000428512 440 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 Z98949.2-201ENST00000440996 144 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 RNU2-56P-201ENST00000516826 190 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 AC022616.3-201ENST00000523940 148 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 FRG2DP-202ENST00000566967 323 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 AC008521.1-201ENST00000587471 187 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 AL445435.1-201ENST00000604232 665 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 AC069545.1-201ENST00000605671 358 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 Pinc.1-201ENST00000616452 154 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 AL136221.1-201ENST00000621449 509 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 SNORA43.4-201ENST00000629559 138 ntBASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-1.06□□□□□ -2.58
AP4S1Q9Y587 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 RNU6-396P-201ENST00000365369 105 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 RNU6-650P-201ENST00000365658 111 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 SNORA67.2-201ENST00000384300 149 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 Y_RNA.504-201ENST00000384481 104 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 MIR452-201ENST00000385020 85 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 SNORA26.5-201ENST00000391215 123 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 RNA5SP482-201ENST00000391269 118 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 ERHP2-201ENST00000402323 299 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AC244250.2-201ENST00000418731 148 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AC012306.1-201ENST00000423267 114 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AL355994.1-201ENST00000424379 260 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 PIGPP3-201ENST00000425307 415 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 MTCO1P27-201ENST00000448269 226 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 RNU6-58P-201ENST00000517143 103 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 MTND2P38-201ENST00000522536 667 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AL355375.2-201ENST00000574825 175 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 MIR5589-201ENST00000579442 60 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AC004987.4-201ENST00000603383 338 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 AC072039.2-201ENST00000608883 439 ntBASIC-1.07□□□□□ -2.58
AP4S1Q9Y587 SNORD114-14-201ENST00000362723 75 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 RNU4-21P-201ENST00000362802 126 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 RNU6-428P-201ENST00000362942 107 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 SNAP23P1-201ENST00000433229 246 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 AC009237.7-201ENST00000447357 229 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 AC008628.2-201ENST00000502605 298 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 RNU6-377P-201ENST00000515965 102 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 RNU6-448P-201ENST00000517052 107 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 AP002802.2-201ENST00000605877 235 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.08□□□□□ -2.58
AP4S1Q9Y587 MIR148A-201ENST00000362215 68 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 SNORA3B-201ENST00000391305 131 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-447P-201ENST00000410293 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 MIR1912-201ENST00000410389 80 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-355P-201ENST00000410427 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-791P-201ENST00000410467 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-705P-201ENST00000410601 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-860P-201ENST00000410860 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-785P-201ENST00000411324 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 AC074290.1-201ENST00000448883 135 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 AC010424.1-201ENST00000506336 297 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU2-12P-201ENST00000517216 168 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 AC120024.3-201ENST00000603167 156 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 AC091304.9-201ENST00000612091 226 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 U6.90-201ENST00000614007 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 U6.70-201ENST00000620287 104 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.09□□□□□ -2.58
AP4S1Q9Y587 RNU6-792P-201ENST00000363490 107 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 RNA5SP205-201ENST00000364653 136 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 RNU6-364P-201ENST00000384387 107 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 MT-TN-201ENST00000387400 73 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 FCF1P9-201ENST00000412546 282 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 ELOCP17-201ENST00000414751 326 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 TIMM9P2-201ENST00000419324 266 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 MTND4LP7-201ENST00000431728 294 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 POLR2KP2-201ENST00000438155 177 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 AL353572.1-201ENST00000442490 417 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 AC109327.2-201ENST00000448339 378 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 MTCO3P8-201ENST00000453691 755 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 PRDX4P1-201ENST00000507189 574 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 MTND3P25-201ENST00000509243 135 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 RNA5SP454-201ENST00000517231 127 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 AC018448.1-201ENST00000552843 316 ntBASIC-1.1□□□□□ -2.59
AP4S1Q9Y587 SNORD92-201ENST00000585078 85 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms