Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 U3.8-201ENST00000363675 217 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 RNA5SP493-201ENST00000364115 91 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 Y_RNA.498-201ENST00000384460 102 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 MIR29C-201ENST00000385231 88 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 Y_RNA.645-201ENST00000391229 102 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.95□□□□□ -2.1
YIPF1Q9Y548 AC114982.1-201ENST00000469402 321 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 RPS29P11-201ENST00000496507 171 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 AC067942.3-201ENST00000512025 362 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 RNU6-408P-201ENST00000515910 100 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 SNORA31.25-201ENST00000517242 134 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 AP005660.1-201ENST00000522972 293 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 GNAI2P1-201ENST00000541815 315 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 AC018448.1-201ENST00000552843 316 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 AC078899.2-201ENST00000595282 212 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 U6.92-201ENST00000636464 89 ntBASIC1.95□□□□□ -2.1
YIPF1Q9Y548 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
YIPF1Q9Y548 Y_RNA.202-201ENST00000364083 110 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RNU6-160P-201ENST00000384591 107 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RNU6-1011P-201ENST00000384668 107 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 MRPL42P3-201ENST00000401492 326 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RNU6-57P-201ENST00000411348 103 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 AC112492.4-201ENST00000456549 352 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RNU6-475P-201ENST00000516073 104 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RNU6-1012P-201ENST00000516606 109 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 MIR4659A-201ENST00000580269 81 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RPS29P30-201ENST00000600975 111 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 AC104695.3-201ENST00000604052 296 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 AC016925.2-201ENST00000605108 242 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 AL138825.1-201ENST00000618587 192 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.94□□□□□ -2.1
YIPF1Q9Y548 RNU1-58P-201ENST00000362413 163 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 RNU6-23P-201ENST00000363283 107 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 SNORD14.1-201ENST00000365609 90 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 Y_RNA.424-201ENST00000384063 103 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 SNORA51.11-201ENST00000384442 131 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 MIR597-201ENST00000384968 97 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 MIR17-201ENST00000385012 84 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 SNORD78.2-201ENST00000391076 69 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 RNU11-3P-201ENST00000391111 133 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
YIPF1Q9Y548 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AL357134.1-201ENST00000445848 426 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AC074290.1-201ENST00000448883 135 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 RNU6-625P-201ENST00000459412 107 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AC074133.1-201ENST00000515696 183 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AC040926.1-201ENST00000530195 238 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AC007229.1-201ENST00000590455 412 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 snoZ196.1-201ENST00000625269 89 ntBASIC1.93□□□□□ -2.1
YIPF1Q9Y548 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
YIPF1Q9Y548 AL159152.1-201ENST00000635019 2587 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
YIPF1Q9Y548 Y_RNA.140-201ENST00000363474 103 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 RNU6-961P-201ENST00000363893 105 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 RNU6-450P-201ENST00000364654 107 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 RNU6-1235P-201ENST00000384559 107 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 SNORA40.19-201ENST00000390846 128 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 MIR1185-2-201ENST00000408687 86 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AC060773.1-201ENST00000421698 310 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 FCF1P4-201ENST00000448326 183 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 NDUFB4P10-201ENST00000452541 359 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 RNU1-131P-201ENST00000458943 161 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 RNU6-498P-201ENST00000459468 107 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AC079804.2-201ENST00000490376 200 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AP003072.1-201ENST00000531740 145 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.92□□□□□ -2.1
YIPF1Q9Y548 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AC040896.1-201ENST00000613819 479 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AC240442.1-201ENST00000616055 283 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
YIPF1Q9Y548 AC245060.5-201ENST00000610778 3293 ntBASIC1.92□□□□□ -2.1
YIPF1Q9Y548 SNORA33.2-201ENST00000365413 134 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 Y_RNA.458-201ENST00000384240 102 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 RNU6-823P-201ENST00000391042 103 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AL356379.1-201ENST00000414105 126 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
YIPF1Q9Y548 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.91□□□□□ -2.1
YIPF1Q9Y548 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AC055731.1-201ENST00000474387 401 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 RPL26P26-201ENST00000480251 434 ntBASIC1.91□□□□□ -2.1
YIPF1Q9Y548 AC090255.1-201ENST00000495779 349 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms