Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL021879.1-201ENST00000611756 288 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 MIR3662-201ENST00000637030 95 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 AC068647.2-201ENST00000637380 353 ntBASIC0.98□□□□□ -2.25
KCNIP3Q9Y2W7 RNU6-222P-201ENST00000362438 107 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 RNU1-22P-201ENST00000363334 158 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.295-201ENST00000364918 102 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 Y_RNA.301-201ENST00000364990 103 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 RNU4-12P-201ENST00000365233 139 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 SNORA25-201ENST00000384384 134 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 RAB28P5-201ENST00000427490 651 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 RPS27P22-201ENST00000478056 241 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 AC010469.2-201ENST00000496412 480 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 AC097462.1-201ENST00000514125 324 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 SNORD116-28-201ENST00000516123 91 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 AC023157.2-201ENST00000540596 141 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 AC093023.1-201ENST00000547375 507 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 MIR5701-3-201ENST00000578890 82 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 MIR5701-1-201ENST00000585138 82 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 MIR4295-201ENST00000585286 85 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 AL513534.2-201ENST00000603836 250 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 MIR6128-201ENST00000615528 109 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 MIR5701-2-201ENST00000615634 82 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 MIR6852-201ENST00000621699 66 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 SNORD3E-202ENST00000627253 216 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.97□□□□□ -2.25
KCNIP3Q9Y2W7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 MTCO3P19-201ENST00000415864 321 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 AL139396.1-201ENST00000421137 167 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 SNORD13-201ENST00000459299 104 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 AC046134.1-201ENST00000514454 666 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 RNU7-40P-201ENST00000516397 64 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 CBX3P8-201ENST00000532412 525 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 AL121579.1-201ENST00000555129 305 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 AC125232.2-201ENST00000592457 143 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 AL022345.2-201ENST00000606307 135 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 SNORA28-201ENST00000606769 126 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.96□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.3-201ENST00000362331 103 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.106-201ENST00000363189 100 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 RNU4-76P-201ENST00000364509 141 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-1264P-201ENST00000383891 107 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 RNU11-5P-201ENST00000391216 129 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-1001P-201ENST00000411265 100 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 RPL23AP36-201ENST00000413895 458 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 EIF1P2-201ENST00000428233 350 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 STAG3L5P-204ENST00000443759 179 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 AC004223.1-201ENST00000479840 271 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-107P-201ENST00000516643 102 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 CYCSP23-201ENST00000519781 313 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 AC027419.1-201ENST00000522976 328 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 AC090617.3-201ENST00000573670 475 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 MIR3684-201ENST00000579779 74 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 MIR3660-201ENST00000584845 100 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 BX284668.6-201ENST00000606899 438 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 MIR6079-201ENST00000635807 62 ntBASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
KCNIP3Q9Y2W7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 SNORA20B-201ENST00000384220 132 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 MIR329-1-201ENST00000385028 80 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 MIR653-201ENST00000385279 96 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 AL355796.1-201ENST00000406706 323 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-922P-201ENST00000516753 99 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 MIR4790-201ENST00000577799 79 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 AC018462.2-201ENST00000605375 395 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 AC106754.2-201ENST00000623006 233 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 MIR3688-2-201ENST00000636963 87 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 MTND5P16-201ENST00000460269 1703 ntBASIC0.94□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.48-201ENST00000362710 103 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-199P-201ENST00000362954 107 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 RNU6-424P-201ENST00000384367 105 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 Y_RNA.516-201ENST00000384541 124 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 MIR562-201ENST00000384894 95 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 ELOCP21-201ENST00000412558 336 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 CYCSP49-201ENST00000420810 319 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 MTND5P5-201ENST00000503764 376 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 AC018710.1-201ENST00000506509 158 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 RNU4-49P-201ENST00000516080 140 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 RNU7-172P-201ENST00000517125 64 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 AC105029.1-201ENST00000520250 669 ntBASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.93□□□□□ -2.26
KCNIP3Q9Y2W7 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms