Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.22□□□□□ -1.73
ZC3H4Q9UPT8 SNORA40.5-201ENST00000391061 128 ntBASIC4.21□□□□□ -1.73
ZC3H4Q9UPT8 MIR1278-201ENST00000408753 81 ntBASIC4.21□□□□□ -1.73
ZC3H4Q9UPT8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.73
ZC3H4Q9UPT8 SNORD65B-201ENST00000459126 73 ntBASIC4.21□□□□□ -1.73
ZC3H4Q9UPT8 RNA5SP20-201ENST00000515976 84 ntBASIC4.21□□□□□ -1.73
ZC3H4Q9UPT8 U6.95-201ENST00000636931 70 ntBASIC4.21□□□□□ -1.73
ZC3H4Q9UPT8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.21□□□□□ -1.73
ZC3H4Q9UPT8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 MIR1294-201ENST00000408503 142 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 RN7SKP101-201ENST00000411376 320 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 EIF4EP4-201ENST00000424916 578 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 AC016717.1-201ENST00000448918 286 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 AC010598.1-201ENST00000510378 103 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 SNORD33.1-201ENST00000516213 88 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-1299P-201ENST00000516316 100 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 MIR4679-2-201ENST00000578358 77 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 MIR3613-201ENST00000579844 87 ntBASIC4.21□□□□□ -1.74
ZC3H4Q9UPT8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 AL365361.1-201ENST00000566942 3481 ntBASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 MIR449A-201ENST00000362113 91 ntBASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 MLLT10P1-201ENST00000418346 262 ntBASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 AC002075.2-201ENST00000425207 252 ntBASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 RPS29P31-201ENST00000446147 164 ntBASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-589P-201ENST00000516485 107 ntBASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.2□□□□□ -1.74
ZC3H4Q9UPT8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 AL159152.1-201ENST00000635019 2587 ntBASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-136P-201ENST00000384663 107 ntBASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 AC016925.1-201ENST00000458303 298 ntBASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 MIR4765-201ENST00000585007 77 ntBASIC4.19□□□□□ -1.74
ZC3H4Q9UPT8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 AC138915.1-201ENST00000565427 1685 ntBASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 RNU2-70P-201ENST00000410718 179 ntBASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 RPL36AP21-201ENST00000490372 323 ntBASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 AC083906.5-201ENST00000503722 328 ntBASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 MIR3186-201ENST00000577404 85 ntBASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 AC103810.1-201ENST00000579873 453 ntBASIC4.18□□□□□ -1.74
ZC3H4Q9UPT8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 TNPO1P3-201ENST00000436471 2662 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-1255P-201ENST00000363434 112 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 SNORD18B-201ENST00000365659 72 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 SNORA48.8-201ENST00000391324 134 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 RNA5SP511-201ENST00000410487 115 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-221P-201ENST00000459541 99 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 AL670379.3-201ENST00000605040 251 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZC3H4Q9UPT8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 Y_RNA.114-201ENST00000363265 113 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-674P-201ENST00000363831 107 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-978P-201ENST00000364371 103 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-484P-201ENST00000384016 107 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-975P-201ENST00000384296 105 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 AL158147.1-201ENST00000443970 75 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 AC023449.1-201ENST00000454464 154 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 RN7SL594P-201ENST00000470590 287 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 RNU6-1231P-201ENST00000517185 103 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 MIR3121-201ENST00000579680 77 ntBASIC4.16□□□□□ -1.74
ZC3H4Q9UPT8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ZC3H4Q9UPT8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZC3H4Q9UPT8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 Y_RNA.120-201ENST00000363304 110 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-755P-201ENST00000364400 103 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-234P-201ENST00000365229 104 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 RNU6-147P-201ENST00000383983 107 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 MIR548A3-201ENST00000385297 97 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 Y_RNA.630-201ENST00000411370 108 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 RPS27P22-201ENST00000478056 241 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 AC107934.2-201ENST00000518653 310 ntBASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.15□□□□□ -1.75
ZC3H4Q9UPT8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms