Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC006001.4-201ENST00000622243 395 ntBASIC1.33□□□□□ -2.2
UBQLN1Q9UMX0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 SNORA33-201ENST00000363664 130 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.160-201ENST00000363677 92 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 RNU5F-3P-201ENST00000363767 117 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 SNORD87-201ENST00000364849 89 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-281P-201ENST00000384212 103 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-793P-201ENST00000384233 104 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-601P-201ENST00000384540 107 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 AC025465.3-201ENST00000510570 311 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.708-201ENST00000516950 96 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 AC100812.1-201ENST00000607622 580 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.32□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-727P-201ENST00000363592 107 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.415-201ENST00000384012 112 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 MIR1185-2-201ENST00000408687 86 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RNU2-7P-201ENST00000410794 178 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RPL37P10-201ENST00000412884 288 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RBMX2P4-201ENST00000441256 376 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 MTND3P10-201ENST00000450967 341 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 snoU13.9-201ENST00000458927 103 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RPL26P26-201ENST00000480251 434 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-1114P-201ENST00000516022 107 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-1146P-201ENST00000516282 102 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.706-201ENST00000516933 99 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 AL121579.1-201ENST00000555129 305 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 SNORA77B-201ENST00000578179 125 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 MZT1P2-201ENST00000604387 248 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 AC009229.3-201ENST00000608056 282 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 AC022306.2-201ENST00000617563 647 ntBASIC1.31□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-222P-201ENST00000362438 107 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.67-201ENST00000362870 100 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.106-201ENST00000363189 100 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.179-201ENST00000363844 90 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-53P-201ENST00000365367 106 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.404-201ENST00000383978 102 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-360P-201ENST00000390944 104 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 MIR190B-201ENST00000401119 79 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 EIF1P2-201ENST00000428233 350 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 RPL7P42-201ENST00000481005 679 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 AC010999.1-201ENST00000611856 324 ntBASIC1.3□□□□□ -2.2
UBQLN1Q9UMX0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.2-201ENST00000362330 96 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-874P-201ENST00000362390 105 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 RNY1P16-201ENST00000363063 111 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-414P-201ENST00000363705 104 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 SNORA72.2-201ENST00000365028 127 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-1240P-201ENST00000365155 104 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-417P-201ENST00000384712 107 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 MIR515-2-201ENST00000384883 83 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 MIR515-1-201ENST00000384884 83 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 RNU6-876P-201ENST00000391295 104 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 RNU4-14P-201ENST00000410858 122 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 AC008134.1-201ENST00000420943 193 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 USP9YP16-201ENST00000430287 407 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 AC069257.2-201ENST00000441819 155 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 USP9YP23-201ENST00000455085 407 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 HMGN1P13-201ENST00000505795 138 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 AC103851.1-201ENST00000506833 274 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 MIR5695-201ENST00000579717 85 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 AC125232.2-201ENST00000592457 143 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 AP001485.1-201ENST00000604799 199 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 U6.108-201ENST00000637764 58 ntBASIC1.29□□□□□ -2.2
UBQLN1Q9UMX0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 SNORD81.2-201ENST00000365153 76 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.364-201ENST00000365532 101 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 MIR329-1-201ENST00000385028 80 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 AL161935.2-201ENST00000414627 60 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 EBAG9P1-201ENST00000418955 543 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 SDAD1P3-201ENST00000427380 333 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 Y_RNA.683-201ENST00000516508 93 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 RNA5SP481-201ENST00000516814 122 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 AC024995.1-201ENST00000523014 93 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 MIR4422-201ENST00000581938 83 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 AC099654.5-201ENST00000636479 350 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 MTND5P16-201ENST00000460269 1703 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 MTND5P35-201ENST00000557537 1720 ntBASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
UBQLN1Q9UMX0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.28□□□□□ -2.21
UBQLN1Q9UMX0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-1283P-201ENST00000365314 105 ntBASIC1.27□□□□□ -2.21
UBQLN1Q9UMX0 RNU6-331P-201ENST00000384724 107 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms