Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC010928.2-201ENST00000588017 287 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AC023043.3-201ENST00000593113 385 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AC103810.6-201ENST00000606708 136 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.140-201ENST00000363474 103 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNU6-454P-201ENST00000364292 107 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 SNORA25.9-201ENST00000365087 128 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNU6-407P-201ENST00000365280 104 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNU6-597P-201ENST00000365620 102 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 SNORA72.4-201ENST00000384174 132 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AL512604.1-201ENST00000404812 257 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 VDAC1P3-201ENST00000434069 851 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AP000705.1-201ENST00000454567 350 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.712-201ENST00000517011 92 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNU6-58P-201ENST00000517143 103 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNU2-60P-201ENST00000517290 128 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AC136628.3-201ENST00000521868 290 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 MIR3121-201ENST00000579680 77 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 snoZ196.1-201ENST00000625269 89 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 DEFB108F-201ENST00000344638 222 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 MIR450A1-201ENST00000362262 91 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 U8.1-201ENST00000362843 134 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.251-201ENST00000364551 99 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.388-201ENST00000383919 113 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNU6-1074P-201ENST00000383995 104 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 MIR15B-201ENST00000385045 98 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNU6-1275P-201ENST00000391087 107 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNA5SP475-201ENST00000410568 110 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC244670.1-201ENST00000436879 112 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNU7-141P-201ENST00000459304 62 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AL049874.1-201ENST00000489560 388 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNA5SP76-201ENST00000516277 87 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 SCARNA15.2-201ENST00000516409 127 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC133485.4-201ENST00000561835 220 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC138907.4-201ENST00000570107 226 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC019159.1-201ENST00000605094 187 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC069294.1-201ENST00000608397 350 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNU6-235P-201ENST00000362644 107 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 U3.9-201ENST00000363823 204 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNU6-837P-201ENST00000391056 108 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 SNORA26.5-201ENST00000391215 123 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AIMP1P2-201ENST00000425294 312 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNU6-155P-201ENST00000516347 100 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNU6-1061P-201ENST00000516530 99 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 RNA5SP480-201ENST00000516840 109 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AL161713.1-201ENST00000555538 145 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC096720.1-201ENST00000604441 183 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 AC099778.2-201ENST00000610904 211 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 MTND5P35-201ENST00000557537 1720 ntBASIC1.95□□□□□ -2.1
NOTCH3Q9UM47 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.85-201ENST00000363014 111 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.116-201ENST00000363292 103 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 Y_RNA.309-201ENST00000365046 111 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 MIR616-201ENST00000385293 97 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AC007919.1-201ENST00000429380 217 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 SNRPEP9-201ENST00000436794 238 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AL121594.1-201ENST00000475906 575 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AL353748.2-201ENST00000622148 471 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AC134026.1-201ENST00000623249 2239 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 RNU6-1141P-201ENST00000364520 107 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 RNU6-142P-201ENST00000384019 107 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 MIR544A-201ENST00000384855 91 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 SNORA26.2-201ENST00000390922 122 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 RNU6-1197P-201ENST00000391183 107 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AL606845.1-201ENST00000404881 255 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AL355497.1-201ENST00000406262 551 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 MIR1278-201ENST00000408753 81 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AC074117.2-201ENST00000417130 397 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AL356320.1-201ENST00000429616 163 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 NDUFB4P6-201ENST00000436819 366 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 AC012308.1-201ENST00000451232 178 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 MLLT10P2-201ENST00000506434 249 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 SNORA43.2-201ENST00000516652 128 ntBASIC1.94□□□□□ -2.1
NOTCH3Q9UM47 MIR4724-201ENST00000579485 89 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms