Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AP002001.1-203ENST00000534002 267 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC018448.1-201ENST00000552843 316 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC233702.2-202ENST00000562547 291 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC055872.1-201ENST00000570978 278 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 MIR4300-201ENST00000581016 96 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 7SK.10-201ENST00000621414 298 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AC068205.3-201ENST00000636385 468 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.14□□□□□ -2.07
SIX4Q9UIU6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.14□□□□□ -2.07
SIX4Q9UIU6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 RNU6-545P-201ENST00000362681 104 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 RNU6-463P-201ENST00000384340 107 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 RAB28P5-201ENST00000427490 651 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 AC098869.1-201ENST00000481627 292 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 AC025465.3-201ENST00000510570 311 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 MIR4503-201ENST00000582187 83 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 RPL17P51-201ENST00000605218 238 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 MIR376A1-201ENST00000616574 68 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 AC008873.1-201ENST00000625051 138 ntBASIC2.13□□□□□ -2.07
SIX4Q9UIU6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SIX4Q9UIU6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SIX4Q9UIU6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SIX4Q9UIU6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.12□□□□□ -2.07
SIX4Q9UIU6 RNU6-20P-201ENST00000384106 107 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 RNU6-713P-201ENST00000384761 107 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 RN7SKP284-201ENST00000411002 343 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.12□□□□□ -2.07
SIX4Q9UIU6 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 AC074133.1-201ENST00000515696 183 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.713-201ENST00000517013 96 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 AP003733.2-201ENST00000529409 171 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.12□□□□□ -2.07
SIX4Q9UIU6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.12□□□□□ -2.07
SIX4Q9UIU6 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 AL109918.3-201ENST00000603072 338 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 AP006437.1-201ENST00000641440 3685 ntBASIC2.12□□□□□ -2.07
SIX4Q9UIU6 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SIX4Q9UIU6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 RNU6-626P-201ENST00000363354 107 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.396-201ENST00000383949 103 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.498-201ENST00000384460 102 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 RNU6-102P-201ENST00000384485 104 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 MIR215-201ENST00000384858 110 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 AL355497.1-201ENST00000406262 551 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 HMGN2P9-201ENST00000476875 229 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 YWHAEP4-201ENST00000505390 198 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 RNU6-107P-201ENST00000516643 102 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 RNU6-667P-201ENST00000517186 102 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 CYCSP23-201ENST00000519781 313 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.11□□□□□ -2.07
SIX4Q9UIU6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.11□□□□□ -2.07
SIX4Q9UIU6 MIR4423-201ENST00000580922 80 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.11□□□□□ -2.07
SIX4Q9UIU6 MIR8062-201ENST00000621515 85 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 AC012640.5-201ENST00000623897 319 ntBASIC2.11□□□□□ -2.07
SIX4Q9UIU6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SIX4Q9UIU6 LINC02555-201ENST00000563933 1951 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SIX4Q9UIU6 snoU2_19.2-201ENST00000363024 80 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNU6-472P-201ENST00000384299 107 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNU6-1026P-201ENST00000384465 108 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 MIR586-201ENST00000385035 97 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 MIR561-201ENST00000385216 97 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 MIR548B-201ENST00000385247 97 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 SNORD115-46-201ENST00000390982 71 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 MIR1283-1-201ENST00000408494 87 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNU4-30P-201ENST00000410245 143 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 HMGN2P3-201ENST00000433603 273 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX4Q9UIU6 HMGN2P5-201ENST00000436882 273 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 HMGN2P18-201ENST00000450680 270 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 snoU13.26-201ENST00000459452 105 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNU6-991P-201ENST00000516168 107 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNU6-966P-201ENST00000516479 104 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNU6-570P-201ENST00000517051 105 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 RNA5SP490-201ENST00000517141 136 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 CYCSP26-201ENST00000534107 320 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 AC005176.2-201ENST00000596933 147 ntBASIC2.1□□□□□ -2.07
SIX4Q9UIU6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SIX4Q9UIU6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.09□□□□□ -2.07
SIX4Q9UIU6 SNORD31B-201ENST00000364977 69 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 SNORA25B-201ENST00000365507 128 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.376-201ENST00000365638 108 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 RNU6-1264P-201ENST00000383891 107 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 SNORD63-201ENST00000384262 68 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.461-201ENST00000384263 103 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 Y_RNA.483-201ENST00000384380 101 ntBASIC2.09□□□□□ -2.07
SIX4Q9UIU6 RNU6-505P-201ENST00000384427 107 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms