Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 U2.9-201ENST00000615427 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.11-201ENST00000616345 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.2-201ENST00000616535 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.3-201ENST00000617785 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.19-201ENST00000618602 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 RNU2-1-201ENST00000618664 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.6-201ENST00000619225 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.5-201ENST00000619465 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.10-201ENST00000620268 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U1.36-201ENST00000620684 176 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U6.92-201ENST00000636464 89 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
LRFN1Q9P244 AC008555.8-201ENST00000623602 2168 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
LRFN1Q9P244 Y_RNA.210-201ENST00000364161 110 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 SNORD114-30-201ENST00000364448 72 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 RNU6-926P-201ENST00000384075 107 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 Y_RNA.471-201ENST00000384312 102 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 MRPL35P1-201ENST00000404272 572 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 SDAD1P3-201ENST00000427380 333 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.27□□□□□ -2.05
LRFN1Q9P244 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 RNU6-625P-201ENST00000459412 107 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 RNU6-635P-201ENST00000516651 102 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 RAC1P9-201ENST00000604990 392 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 MIR6895-201ENST00000613497 78 ntBASIC2.27□□□□□ -2.05
LRFN1Q9P244 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LRFN1Q9P244 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
LRFN1Q9P244 AC245060.5-201ENST00000610778 3293 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LRFN1Q9P244 Y_RNA.47-201ENST00000362697 108 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 Y_RNA.152-201ENST00000363578 100 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNA5SP456-201ENST00000364002 114 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 Y_RNA.214-201ENST00000364201 112 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNU6-1310P-201ENST00000384153 107 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNU6-1109P-201ENST00000391187 107 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 AL117342.1-201ENST00000404861 406 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNA5SP475-201ENST00000410568 110 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNA5SP501-201ENST00000410990 112 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNU6-130P-201ENST00000411112 103 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 Z98742.3-201ENST00000418637 326 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 ELOCP20-201ENST00000422460 345 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RAB28P5-201ENST00000427490 651 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RPEP5-201ENST00000441137 268 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 AC073910.1-201ENST00000445047 438 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RPS29P21-201ENST00000496272 170 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNU6-397P-201ENST00000516226 104 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 SNORA31.11-201ENST00000516528 139 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 RNU6-897P-201ENST00000517135 105 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.26□□□□□ -2.05
LRFN1Q9P244 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LRFN1Q9P244 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.26□□□□□ -2.05
LRFN1Q9P244 MYL12BP1-201ENST00000569826 507 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 MIR4659A-201ENST00000580269 81 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.26□□□□□ -2.05
LRFN1Q9P244 AL109918.3-201ENST00000603072 338 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 AL121655.1-201ENST00000605811 308 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 AC006001.4-201ENST00000622243 395 ntBASIC2.26□□□□□ -2.05
LRFN1Q9P244 ZNF702P-202ENST00000434269 1966 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LRFN1Q9P244 snoU2-30.2-201ENST00000362805 70 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RNU6-238P-201ENST00000363313 106 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 Y_RNA.176-201ENST00000363815 109 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RNU6-1240P-201ENST00000365155 104 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 SNORA6-201ENST00000384033 151 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RPL21P1-201ENST00000399532 476 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 AL512604.1-201ENST00000404812 257 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RNU4-53P-201ENST00000410828 140 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RPL23AP3-201ENST00000453844 468 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 snoU13.15-201ENST00000459407 104 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 MTCO2P24-201ENST00000515611 426 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RNU6-408P-201ENST00000515910 100 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RNU6-1146P-201ENST00000516282 102 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RNA5SP82-201ENST00000516707 92 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 RNA5SP402-201ENST00000517148 110 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 PRR13P7-201ENST00000605538 430 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 AC011476.5-201ENST00000615594 130 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 AC240442.1-201ENST00000616055 283 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 AC010205.1-201ENST00000616668 449 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 MIR338-201ENST00000636369 67 ntBASIC2.25□□□□□ -2.05
LRFN1Q9P244 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LRFN1Q9P244 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LRFN1Q9P244 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LRFN1Q9P244 RNU6-1266P-201ENST00000362794 105 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 Y_RNA.144-201ENST00000363521 113 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 Y_RNA.574-201ENST00000384766 95 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 RN7SKP192-201ENST00000411291 327 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRFN1Q9P244 AL158823.1-201ENST00000418441 478 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 MTCYBP9-201ENST00000431021 303 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 AC099677.2-201ENST00000436385 175 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 RNU6-1041P-201ENST00000516254 102 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 Y_RNA.713-201ENST00000517013 96 ntBASIC2.24□□□□□ -2.05
LRFN1Q9P244 AC021269.2-201ENST00000532318 330 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms