Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC091144.1-201ENST00000519573 138 ntBASIC1.7□□□□□ -2.14
HACD3Q9P035 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.7□□□□□ -2.14
HACD3Q9P035 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
HACD3Q9P035 MIR8081-201ENST00000611533 95 ntBASIC1.7□□□□□ -2.14
HACD3Q9P035 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.7□□□□□ -2.14
HACD3Q9P035 AC091925.1-201ENST00000623204 462 ntBASIC1.7□□□□□ -2.14
HACD3Q9P035 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HACD3Q9P035 AC245060.5-201ENST00000610778 3293 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 Y_RNA.5-201ENST00000362334 102 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 Y_RNA.314-201ENST00000365114 102 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 Y_RNA.419-201ENST00000384041 102 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 MIR1289-2-201ENST00000408360 111 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 Y_RNA.595-201ENST00000410403 105 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 ELOCP21-201ENST00000412558 336 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 AC016909.1-201ENST00000415916 166 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 RNU7-169P-201ENST00000459456 61 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 AC027575.1-201ENST00000481064 460 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 AC011406.1-201ENST00000512440 370 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 RN7SKP49-201ENST00000516675 260 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 MIR2355-201ENST00000517199 87 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 SUMO2P18-201ENST00000518873 252 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 AC144568.1-201ENST00000520139 137 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 GNAI2P1-201ENST00000541815 315 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 MIR4713-201ENST00000582691 75 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.69□□□□□ -2.14
HACD3Q9P035 U1.36-201ENST00000620684 176 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 AC006001.4-201ENST00000622243 395 ntBASIC1.69□□□□□ -2.14
HACD3Q9P035 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.69□□□□□ -2.14
HACD3Q9P035 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
HACD3Q9P035 RNU6-862P-201ENST00000362804 105 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 MIR1185-2-201ENST00000408687 86 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.68□□□□□ -2.14
HACD3Q9P035 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 AC025647.1-201ENST00000517879 253 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 CYCSP23-201ENST00000519781 313 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 SUB1P4-201ENST00000566062 339 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 MIR3683-201ENST00000580847 82 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 AL050343.2-201ENST00000607338 280 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.68□□□□□ -2.14
HACD3Q9P035 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.68□□□□□ -2.14
HACD3Q9P035 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 Y_RNA.61-201ENST00000362835 102 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 Y_RNA.252-201ENST00000364556 101 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 AC096644.2-201ENST00000429278 159 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 UQCRBP2-201ENST00000447827 297 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.67□□□□□ -2.14
HACD3Q9P035 PCNPP5-201ENST00000452246 481 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 SNORD116.3-201ENST00000517176 78 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 AC116312.1-201ENST00000606841 314 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 AL353149.1-201ENST00000610667 244 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
HACD3Q9P035 MIR338-201ENST00000636369 67 ntBASIC1.67□□□□□ -2.14
HACD3Q9P035 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
HACD3Q9P035 Y_RNA.287-201ENST00000364853 94 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 Y_RNA.428-201ENST00000384078 102 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 AL627390.1-201ENST00000396055 340 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 SNORD12B-201ENST00000410433 91 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 Y_RNA.605-201ENST00000410577 105 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 RNA5SP100-201ENST00000410903 110 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 RNA5SP59-201ENST00000410922 110 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 HMGN2P34-201ENST00000437647 269 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.66□□□□□ -2.14
HACD3Q9P035 AC074133.1-201ENST00000515696 183 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 RNU6-107P-201ENST00000516643 102 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.66□□□□□ -2.14
HACD3Q9P035 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HACD3Q9P035 AL442163.3-201ENST00000554110 156 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 MIR5094-201ENST00000578766 85 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 AL080274.1-201ENST00000605565 220 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.66□□□□□ -2.14
HACD3Q9P035 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.66□□□□□ -2.14
HACD3Q9P035 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.66□□□□□ -2.14
HACD3Q9P035 snoU2-30.2-201ENST00000362805 70 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 Y_RNA.197-201ENST00000364004 102 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 AC018865.2-201ENST00000423631 129 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 SNORA40.9-201ENST00000515895 93 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 RNU6-976P-201ENST00000516086 111 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 RNU6-911P-201ENST00000516523 104 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 AC018448.1-201ENST00000552843 316 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.65□□□□□ -2.15
HACD3Q9P035 U2.1-201ENST00000618978 145 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 MIR4272-201ENST00000635924 64 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.65□□□□□ -2.15
HACD3Q9P035 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HACD3Q9P035 ZNF72P-201ENST00000425869 1908 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 AC006026.1-201ENST00000444025 1803 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 RNU1-96P-201ENST00000364163 162 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 RNU6-1240P-201ENST00000365155 104 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 SNORD42.2-201ENST00000365570 69 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 RNU6-1264P-201ENST00000383891 107 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 Y_RNA.395-201ENST00000383945 109 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 Y_RNA.431-201ENST00000384086 102 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 RNU6-708P-201ENST00000384217 107 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 RNY3P4-201ENST00000384428 101 ntBASIC1.64□□□□□ -2.15
HACD3Q9P035 AC009310.1-201ENST00000414414 451 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms