Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AL391903.3-201ENST00000612158 163 ntBASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LMCD1Q9NZU5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 MIR30E-201ENST00000362104 92 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 RNU6-1205P-201ENST00000363625 106 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 RNA5SP173-201ENST00000364857 136 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 SNORA7.4-201ENST00000384249 137 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AL591034.1-201ENST00000407447 340 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 CYCSP49-201ENST00000420810 319 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AL714022.1-201ENST00000439897 151 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 RNU7-141P-201ENST00000459304 62 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 MIR5006-201ENST00000583027 110 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 ELOCP29-201ENST00000588193 334 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AL034555.1-201ENST00000604816 211 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 SNORD11B-201ENST00000607707 90 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AC004832.5-201ENST00000608677 401 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 PCGEM1.1-201ENST00000613431 131 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AC073308.1-201ENST00000623696 305 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AL136164.4-201ENST00000625013 2135 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 CENPCP1-201ENST00000533085 2578 ntBASIC3.48□□□□□ -1.85
LMCD1Q9NZU5 PWAR6-201ENST00000552334 4618 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 RNU6-1131P-201ENST00000364955 107 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 SNORA18.2-201ENST00000383865 132 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 RNU6-106P-201ENST00000384405 107 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 RNU6-880P-201ENST00000384526 107 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 Y_RNA.521-201ENST00000384560 114 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 SNORA1.3-201ENST00000384676 136 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 MIR548A3-201ENST00000385297 97 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 SNORA75.5-201ENST00000391291 81 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 AL355497.1-201ENST00000406262 551 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 RNU6-710P-201ENST00000410424 105 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 AL158147.1-201ENST00000443970 75 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 AC008885.1-201ENST00000514930 301 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 MIR4474-201ENST00000579189 78 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 AC005562.2-201ENST00000618264 111 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 AC015726.2-201ENST00000620112 122 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 MIR622-201ENST00000638396 96 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 AL353746.1-201ENST00000566293 6881 ntBASIC3.47□□□□□ -1.85
LMCD1Q9NZU5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC008264.2-201ENST00000610193 3731 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 SNORD58C-201ENST00000365223 64 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.368-201ENST00000365547 113 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AL606845.1-201ENST00000404881 255 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 RNA5SP504-201ENST00000410676 117 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC006445.2-201ENST00000510061 472 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.685-201ENST00000516532 108 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC025281.1-201ENST00000567026 265 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.757-201ENST00000578934 114 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 MIR3609-201ENST00000582661 80 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC068205.3-201ENST00000636385 468 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 AC103988.1-201ENST00000566382 2177 ntBASIC3.46□□□□□ -1.86
LMCD1Q9NZU5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 AC000403.1-201ENST00000613696 3585 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 SNORD114-19-201ENST00000363072 75 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.229-201ENST00000364347 113 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 RNU6-1082P-201ENST00000364574 107 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.310-201ENST00000365063 113 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 RPS27P1-201ENST00000450552 247 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 AC107626.1-201ENST00000471084 183 ntBASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LMCD1Q9NZU5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 SNORD72-201ENST00000390994 80 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 Y_RNA.584-201ENST00000391090 114 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 RNU6-554P-201ENST00000410466 106 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 RNU6-383P-201ENST00000410864 94 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 snoU13.28-201ENST00000459235 104 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 RNU6-344P-201ENST00000516635 111 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 RNU2-44P-201ENST00000516795 194 ntBASIC3.44□□□□□ -1.86
LMCD1Q9NZU5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms