Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 RNU6-911P-201ENST00000516523 104 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 RN7SKP49-201ENST00000516675 260 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AC091144.1-201ENST00000519573 138 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 GNAI2P1-201ENST00000541815 315 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AC124312.5-201ENST00000604451 268 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 RPL17P51-201ENST00000605218 238 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 AL078596.1-201ENST00000624856 447 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 ZNF702P-202ENST00000434269 1966 ntBASIC1.76□□□□□ -2.13
NDE1Q9NXR1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AC245060.5-201ENST00000610778 3293 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 RNA5SP276-201ENST00000362580 94 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 SNORD114-6-201ENST00000364393 72 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 SNORD14.1-201ENST00000365609 90 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.389-201ENST00000383924 113 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 MIR548B-201ENST00000385247 97 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AL445646.1-201ENST00000431784 216 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AC108210.2-201ENST00000503681 201 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 RNU6-397P-201ENST00000516226 104 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 SNORA40.14-201ENST00000516543 86 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 MIR2355-201ENST00000517199 87 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 DEFB122-202ENST00000569013 197 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 MIR4659A-201ENST00000580269 81 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AC022432.1-201ENST00000595739 310 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AC005034.5-201ENST00000604219 466 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AL590240.4-201ENST00000616908 390 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 AC008873.1-201ENST00000625051 138 ntBASIC1.75□□□□□ -2.13
NDE1Q9NXR1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
NDE1Q9NXR1 RNU6-961P-201ENST00000363893 105 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 MIR586-201ENST00000385035 97 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 RNU6-823P-201ENST00000391042 103 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 SNORD78.2-201ENST00000391076 69 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 ELOCP21-201ENST00000412558 336 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 SRIP3-201ENST00000413200 219 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 MTCO3P19-201ENST00000415864 321 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AC123900.1-201ENST00000420390 96 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 BX510359.4-201ENST00000423750 193 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AC096920.1-201ENST00000423991 241 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.74□□□□□ -2.13
NDE1Q9NXR1 RNU6-408P-201ENST00000515910 100 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 RNU6-475P-201ENST00000516073 104 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AP002001.1-203ENST00000534002 267 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AC018448.1-201ENST00000552843 316 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AC055872.1-201ENST00000570978 278 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AC026271.5-201ENST00000577873 130 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 MIR4648-201ENST00000580107 72 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 MIR4719-201ENST00000585233 84 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 RPS29P30-201ENST00000600975 111 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.812-201ENST00000610788 101 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 PART1_1.1-201ENST00000611761 217 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.784-201ENST00000613803 101 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.787-201ENST00000616522 101 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.780-201ENST00000617336 101 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 AL138825.1-201ENST00000618587 192 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.801-201ENST00000619005 101 ntBASIC1.74□□□□□ -2.13
NDE1Q9NXR1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.74□□□□□ -2.13
NDE1Q9NXR1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
NDE1Q9NXR1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NDE1Q9NXR1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.73□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.158-201ENST00000363651 101 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 RNU6-1164P-201ENST00000364428 107 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 RNU6-639P-201ENST00000384074 107 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 MIR300-201ENST00000401138 83 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AL590004.1-201ENST00000405321 300 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 RNU6-130P-201ENST00000411112 103 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 RNU6-57P-201ENST00000411348 103 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 MTCO1P44-201ENST00000441935 243 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 PCNPP5-201ENST00000452246 481 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 snoU13.23-201ENST00000458863 104 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 RNU6-625P-201ENST00000459412 107 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 RNU7-57P-201ENST00000459540 60 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AC023442.1-201ENST00000531247 422 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AL390123.1-201ENST00000603216 237 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AL021879.1-201ENST00000611756 288 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AC240442.1-201ENST00000616055 283 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AC131280.1-202ENST00000624067 4211 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AC092881.1-201ENST00000638218 2733 ntBASIC1.73□□□□□ -2.13
NDE1Q9NXR1 AC008555.8-201ENST00000623602 2168 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 RNU6-975P-201ENST00000384296 105 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 AL079342.1-201ENST00000401460 267 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 RNU6-101P-201ENST00000410323 104 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 DPH3P2-201ENST00000422618 250 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 RAB28P5-201ENST00000427490 651 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 HSPE1P21-201ENST00000438283 308 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 RPEP5-201ENST00000441137 268 ntBASIC1.72□□□□□ -2.13
NDE1Q9NXR1 FCF1P4-201ENST00000448326 183 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms